|
Name : kdsB1 (Arad_0195) Accession : YP_002542871.1 Strain : Genome accession: NC_011985 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 172911 - 173666 bp Length : 756 bp Strand : - Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS DNA sequence : ATGACAGATTCCAACTTAGACAAGACGCTGGTGCTCATTCCGGCCCGGATGGCCTCCACGCGCCTGCCGGGCAAACCGCT CGCCGATATTTGCGGCCTGCCAATGATCGTACAGGTTGCCAAGCGCGCGCGCGAGGCGGCGATCGGTCGCATCGTCGTCG CCGTCGATCATGACGATACCTATGCCGCCGTTGCCAATGCCGGTTTCGATGTCGTCATGACGGGCATGGATCATCAATCC GGCTCCGATCGCATCCATGAAGCGCTGCGGGCCGTGGATCCGGATGGCCGCGCCGAGATCATCGTCAATGTCCAGGGCGA CCTGCCGACCATCGATCCCGAAACCATCCGCGCCTCGCTGCGCCCGCTCGAAAACCCTGCCGTCGACATCGCGACGCTGA CCGTCGAGATCAAGGACGAGGAAGAAAAGACCTTGCCGAGCGTCGTCAAGGTCGTCGGCTCTGCTATTTCCGAAAGCCGG CTGCGCGCACTCTACTTTACCCGCGCCACCGCCCCTTACGGCAAGGGGCCGCTCTATCATCACATCGGCCTCTATACCTA TCGCCGCGCCGCGCTGGAAAGGTTCGTCAGCCTCGGCCCTTCGCCGCTGGAAAAGCGCGAATCGCTGGAGCAATTGCGGG CGCTGGAGGCCGGCATGCGTATCGATGTCGAGATCGTTGACACGATCCCGCTCGGTGTCGATACTGCCGCCGACCTCGAA AAGGCCCGACGCATCCTTTCCGGCGCCTCTCGCTGA Protein sequence : MTDSNLDKTLVLIPARMASTRLPGKPLADICGLPMIVQVAKRAREAAIGRIVVAVDHDDTYAAVANAGFDVVMTGMDHQS GSDRIHEALRAVDPDGRAEIIVNVQGDLPTIDPETIRASLRPLENPAVDIATLTVEIKDEEEKTLPSVVKVVGSAISESR LRALYFTRATAPYGKGPLYHHIGLYTYRRAALERFVSLGPSPLEKRESLEQLRALEAGMRIDVEIVDTIPLGVDTAADLE KARRILSGASR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 2e-31 | 42 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 3e-31 | 41 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-31 | 41 |
