Gene Information

Name : ragA (Arad_1499)
Accession : YP_002543849.1
Strain :
Genome accession: NC_011985
Putative virulence/resistance : Virulence
Product : two-component response regulator protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1191573 - 1192331 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence : 
ATGACAACCTCTGGCCAACATGCTGTGGACTCCTCCGATTCCGGTTGTGCTAAAGCACTGCCGGCGGATAATGTCGCCCA
CATGAAGATTTTGATTATCGAAGACGATCTTGAGGCTGCCGCCTATCTCACCAAGGCGTTTCGTGAGGCTGGCATTGTTG
CCGACCATGCGAGCGACGGCGAGAGCGGTCTCTTCATGGGCACGGAGAATGCCTACGACGTCGCCATCATCGACCGCATG
CTGCCGCGCCGCGACGGTCTTTCCGTCATCAGCGAGCTGCGCCGCAAGGGTGTGCACACGCCGGTTCTCATTCTTTCCGC
GCTTGGCCAGGTCGACGACCGCGTCACCGGCCTTCGCGCCGGCGGTGATGACTACCTGCCGAAACCCTACGCCTTCAGCG
AATTGCTCGCCCGCGTTGAAGTTCTCGGCCGCCGCAAGGGCACGCCGGATCAGGATGTGCTCTACCGCGTTGCCGATCTG
GAGCTTGACCGGCTGTCGCATGAGGTCCGCCGCGGCGGCAAGGAGATTCCCTTGCAGCCGCGCGAGTTCCGCCTGCTGGA
ATATCTGATGAAGAATGCCGGTCAGGTGGTGACGCGCACCATGCTGCTCGAAAATGTCTGGGATTATCACTTCGATCCGC
AGACGAACGTTATCGACGTCCATGTCTCGCGCCTGCGCTCGAAGATCGAAAAAGACTTCAGCCAGCCGCTGTTGAAGACG
ATCCGTGGCGCCGGCTACATGATCAAGGACGAAGGATGA

Protein sequence : 
MTTSGQHAVDSSDSGCAKALPADNVAHMKILIIEDDLEAAAYLTKAFREAGIVADHASDGESGLFMGTENAYDVAIIDRM
LPRRDGLSVISELRRKGVHTPVLILSALGQVDDRVTGLRAGGDDYLPKPYAFSELLARVEVLGRRKGTPDQDVLYRVADL
ELDRLSHEVRRGGKEIPLQPREFRLLEYLMKNAGQVVTRTMLLENVWDYHFDPQTNVIDVHVSRLRSKIEKDFSQPLLKT
IRGAGYMIKDEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-38 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ragA YP_002543849.1 two-component response regulator protein BAC0125 Protein 1e-46 47
ragA YP_002543849.1 two-component response regulator protein BAC0347 Protein 1e-46 47
ragA YP_002543849.1 two-component response regulator protein BAC0111 Protein 4e-49 46
ragA YP_002543849.1 two-component response regulator protein BAC0083 Protein 9e-45 45
ragA YP_002543849.1 two-component response regulator protein BAC0308 Protein 2e-41 45
ragA YP_002543849.1 two-component response regulator protein BAC0638 Protein 4e-37 45
ragA YP_002543849.1 two-component response regulator protein BAC0197 Protein 1e-42 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ragA YP_002543849.1 two-component response regulator protein VFG0596 Protein 5e-39 42
ragA YP_002543849.1 two-component response regulator protein VFG1390 Protein 4e-37 41
ragA YP_002543849.1 two-component response regulator protein VFG1389 Protein 2e-32 41