Gene Information

Name : Avi_9096 (Avi_9096)
Accession : YP_002542601.1
Strain :
Genome accession: NC_011984
Putative virulence/resistance : Unknown
Product : transposition-related protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 66774 - 67127 bp
Length : 354 bp
Strand : -
Note : -

DNA sequence :
ATGATCGCGCTTCCGTCTGGCCAGGATGTGCGTGTCTGGATAGCGACAGGTTATACGGACATGCGGTGTGGATTTCCATC
GTTAGCGCTTCGGGTGCAGGAGGTGCTGAAGCATGAACCGCTCAGTGGACATTTGTTTTGCTTCAGGGGTCGGCGCGGCG
ACCTGATCAAGTTGATCTGGCATGATGGCCAGGGCAGTTGCCTGTTCACAAAAAGGCTTGAGCGGGGCAAGTTCATCTGG
CCTTCTGCGGACGGTGGCGCGGTGGCGATCTCGCCTGCGCAACTGTCTTATCTGCTGTCTGGGATTGACTGGCGAAATCC
GCAACAAACATGGCGTCCAACAAAGGTTGGATAG

Protein sequence :
MIALPSGQDVRVWIATGYTDMRCGFPSLALRVQEVLKHEPLSGHLFCFRGRRGDLIKLIWHDGQGSCLFTKRLERGKFIW
PSADGGAVAISPAQLSYLLSGIDWRNPQQTWRPTKVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 2e-28 62
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 3e-31 60
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 3e-31 60
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 3e-31 60
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 3e-21 58
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-28 58
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-28 58
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 4e-30 57
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 4e-30 57
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 4e-28 57
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 4e-28 57
unnamed AAC31493.1 L0014 Not tested LEE Protein 3e-28 57
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 4e-28 57
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 3e-28 57
unnamed AAL99258.1 unknown Not tested LEE Protein 3e-28 57
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 3e-28 57
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-28 57
unnamed AAL08461.1 unknown Not tested SRL Protein 5e-28 56
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 2e-27 56
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 2e-27 56
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 9e-28 55
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 9e-28 55
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 2e-26 54
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 2e-26 54
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-27 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Avi_9096 YP_002542601.1 transposition-related protein VFG1665 Protein 1e-31 60
Avi_9096 YP_002542601.1 transposition-related protein VFG1517 Protein 1e-21 58
Avi_9096 YP_002542601.1 transposition-related protein VFG1698 Protein 3e-29 58
Avi_9096 YP_002542601.1 transposition-related protein VFG0792 Protein 1e-28 57
Avi_9096 YP_002542601.1 transposition-related protein VFG1709 Protein 1e-28 57
Avi_9096 YP_002542601.1 transposition-related protein VFG1052 Protein 2e-28 56
Avi_9096 YP_002542601.1 transposition-related protein VFG1737 Protein 4e-28 54