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Name : cpaF (Arad_9999) Accession : YP_002542509.1 Strain : Genome accession: NC_011983 Putative virulence/resistance : Virulence Product : pilus assembly secretion ATP-binding protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2608344 - 2609960 bp Length : 1617 bp Strand : - Note : - DNA sequence : ATGACAAAGGGACACATGACTCCGGAAGCTTTTCTGAGCGCATTGGAGGCGGCGGGGCACCTCACGTCCGAAGCCGTGCA GCGCGCGCTTTCCGTCCAGGCCGCGACGAGCCATCCCGTCGATATCGTTATGCGCGAGCTGGCATTCATGCCGGATGCAC AGCTTGCGGAAGCGATGGCGCTCTTCTGTCAATGCGATTGCTGCGCCGTCATTGCGGGCGTCGACGAAGAGTTGCTTGAG CGCATCGGAACAGTCTTTGCGCAGGCGCATGCGATCATACCTTGCCAGAGGCAGGGCGACAGTCTCAGGTTGATCGTTGC GGACCCGTTTGCATTCTCGACCATTGGGGCGGTTTCCTATCTCGCCGATCTTCCCGCCGCCATCAGCGTCGCTCCGCGCT TGCTGATCGACGAATTTTTTCGAGAACGGGCCAAAGGCCAAAATTCATCCGAGGCCGCGGATTTCCACGATAGCGCCGAA GCGGAGGATGTGGACCGTCTGCTGGATATTGCCCGCGAGGCGCCGACCGTGAAGTTCGTTTCACGCATCCTGCAGCGGGC GGTGGATGAAAAGGCAACGGATATACACATCGAGCCGCTTGAGGACTCGATCAGGATTCGCCTGAGAAGAGACGGTCTGC TCGACACGCTGGAAATCGTGCCAAAGTTTAACGCGGCGGCGGTGACGAGCCGCATCAAGATCCTGTCCCGCTTGAACATT TCCGAACGCCGGCTGCCACAAGACGGCCGCCTTAGAGCCTCGATCAGAGGACAGGAAGTGGACTTTCGTGTTTCGGTGAT GCCAAGCATCCACGGCGAAACGATTGTGCTGCGCATCCTTGACCGCTCCAATATCCGGCTGGATCTGGCGGCTCTCGGTT ATCAACCCGAAAGCATGGCGACCATCGCGAGGATCGTGCGACGGCCGAACGGGATCATGCTCCTGACGGGTCCGACGGGC TCGGGCAAGACGACAACGCTCTATTCCATCCTCAGCGACATCAATGATGCCAAATCGAAGATCTTCACGGTGGAGGATCC CGTCGAGTACCGGCTTGCGGGAGTAACGCAGTTGCAGGTGGAACCATCCATCGGTTTGACCTTTGCCACGGCGCTTCGTT CGGTCCTGCGTCAGGATCCGGACATTATTCTCCTTGGTGAAATCAGAGATCCCGAGACGGCGAGGATTGCCGTGCAGGCA GCGCTGACCGGACACCTCGTCCTGTCGACACTGCATACCAACAGCGCGGCCGGCGCCATCAATCGGCTGCGCGAAATGGG TGTCGAGAGCTATCTGCTGGCCGCGACGCTCCGGGGCATCATTGGTCAGCGCCTCCTGAGAAAGGCATGCCCGGATTGTT CGAGCCATCCGGCGGGCATCCGCTGCGAGACCTGCAATGGCGCCGGTTATTCCGGCCGGCGTGCGGTCTACGAAATACTG GAAGTCACGGAACCGATACGCGAAGCGATCGGCCGGGATCTGATCCAGAGCGAAATCGAAAATCTGGCGATCAAGGAAGG GATGCGTCCGCTGGCGCAACAAGCGCGTGAACTGGTCGCTGCAGGCATGACCACCGTCGCTGAAGTCTCGCGCGTCGTCG ATCTGCAAGGAGAGTGA Protein sequence : MTKGHMTPEAFLSALEAAGHLTSEAVQRALSVQAATSHPVDIVMRELAFMPDAQLAEAMALFCQCDCCAVIAGVDEELLE RIGTVFAQAHAIIPCQRQGDSLRLIVADPFAFSTIGAVSYLADLPAAISVAPRLLIDEFFRERAKGQNSSEAADFHDSAE AEDVDRLLDIAREAPTVKFVSRILQRAVDEKATDIHIEPLEDSIRIRLRRDGLLDTLEIVPKFNAAAVTSRIKILSRLNI SERRLPQDGRLRASIRGQEVDFRVSVMPSIHGETIVLRILDRSNIRLDLAALGYQPESMATIARIVRRPNGIMLLTGPTG SGKTTTLYSILSDINDAKSKIFTVEDPVEYRLAGVTQLQVEPSIGLTFATALRSVLRQDPDIILLGEIRDPETARIAVQA ALTGHLVLSTLHTNSAAGAINRLREMGVESYLLAATLRGIIGQRLLRKACPDCSSHPAGIRCETCNGAGYSGRRAVYEIL EVTEPIREAIGRDLIQSEIENLAIKEGMRPLAQQARELVAAGMTTVAEVSRVVDLQGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-72 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-73 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cpaF | YP_002542509.1 | pilus assembly secretion ATP-binding protein | VFG0182 | Protein | 4e-73 | 44 |
| cpaF | YP_002542509.1 | pilus assembly secretion ATP-binding protein | VFG2426 | Protein | 2e-62 | 43 |
| cpaF | YP_002542509.1 | pilus assembly secretion ATP-binding protein | VFG2048 | Protein | 2e-72 | 41 |
