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Name : Arad_9956 (Arad_9956) Accession : YP_002542478.1 Strain : Genome accession: NC_011983 Putative virulence/resistance : Virulence Product : reverse transcriptase/maturase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 2565888 - 2567402 bp Length : 1515 bp Strand : + Note : - DNA sequence : ATGCAGCACAAGCTTGCAACATGGGCCGAACACGATCCGAACCGAAGGTTCGATCGGCTTCTTCGGCTTATTGCCAACCG GGAATGGCTGGCTGAGACTGCTCGGATCGTTTTGGCGTCAAGTGGCGCACGAACACCGGGCATTGACGGAATGGACAAGC AACGACTGCAGGTCAAACTGGATCAGCATCTGGACGACCTGCGGACAAGCCTGCTGGAGGAGAGTTATCGCCCCCAGCCG GTCAAGCGCATCTATATCCCGAAATCAAACGGCAAGCTACGACCACTGGGTATTCCGACCCTGACGGACCGCATCGTTCA ACGCGCCATGCTGATGGCCATGGAGCCGATCTGGGAAAGCGATTTCCATCGTCTATCCTATGGCTTCCGGCCGGAACGGA GCGTGCATCATGCCGTCCGCACCGTGAGGATACAGCTTCAGGATGGTGCCGACACGACGAGGGGCCGCTGGATCATCGAA GGTGATCTGGCAAGCTACTTCGACACGGTCCACCACCGGCTGCTTCTCAAATGTGTGCGGCGACGGGTGCAGGACGGGCG TTTCGTCGATCTTCTCTGGCGGTTCCTGAAGGCAGGGCACATTGATCGTGGCCTGTTTACGGCCTCCAGCGAGGGTGTTC CGCAAGGTGGCGTTCTGTCACCGCTCCTGTCCAACATCATGCTCCACGAGTTTGATGCCTGGTTGGAGGCGAAATACCTG AGCGACAAGGCCCGCAAGGACCGATGGGCATGGAACTTCGGCATCAAGCAGGGGCGCCCCATTACGGTTCGAGAGAGCCG GCAATGGAAACCGGCCGTTGCCTATTGCCGATACGCTGACGACTTCGTCGTGATCGTAAAAGGAACCAAGGCTCAGGCAG AAGAAATCCGCGAGGAGTGCCGGGCGTTTCTGGAAGGTGAGTTGAAGTTGACGCTGAACATGGAAAAGACCCATGTTACA CACGTCAATGACGGCTTCGTCTTCCTGGGGCACCGGATCATTCGCAAGCGAGGGGTACACGGACGGATGTCCGTCGTCAC GACGATACCCAAGGAAAAGGCCAAGGGGTTTGTTCGCAGACTTACCGAAACCCTTTCCGGCAATCATAGTGTCAGTACGG TCGACATGATCGCCAGCCTGAACCGCCAGTTGGTGGGTTGGGCGGCGTTCTACAAGTTCACCGACTTCACGGCGTACGTA TTCCGGCGCATCGACCATGTCGTGTTCTGGAAAATGGCGCATTGGCTGGGACATAAATACCGATCTCGCATCAAACCCTT GATGCGGAAATGGTACCGGGTCCCGGAACCGGGCAAGGCGAAAACCTGGCTCGTGTTTGGTCGGAATGAACGCGGCGGCC CCGTCGGCAAAGCGCTGCAACGGCTTGTCTCAAGCCCCAAGGCGCAATTCCGGTGGCGTAATCCGGAGGAGAACCCATAC ATCTTCCGGATCGAAAACCGCAGCACCGTCACGTCGAACTATCATGATGTTGCAATGGCCATGGGCCAAGCTTGA Protein sequence : MQHKLATWAEHDPNRRFDRLLRLIANREWLAETARIVLASSGARTPGIDGMDKQRLQVKLDQHLDDLRTSLLEESYRPQP VKRIYIPKSNGKLRPLGIPTLTDRIVQRAMLMAMEPIWESDFHRLSYGFRPERSVHHAVRTVRIQLQDGADTTRGRWIIE GDLASYFDTVHHRLLLKCVRRRVQDGRFVDLLWRFLKAGHIDRGLFTASSEGVPQGGVLSPLLSNIMLHEFDAWLEAKYL SDKARKDRWAWNFGIKQGRPITVRESRQWKPAVAYCRYADDFVVIVKGTKAQAEEIREECRAFLEGELKLTLNMEKTHVT HVNDGFVFLGHRIIRKRGVHGRMSVVTTIPKEKAKGFVRRLTETLSGNHSVSTVDMIASLNRQLVGWAAFYKFTDFTAYV FRRIDHVVFWKMAHWLGHKYRSRIKPLMRKWYRVPEPGKAKTWLVFGRNERGGPVGKALQRLVSSPKAQFRWRNPEENPY IFRIENRSTVTSNYHDVAMAMGQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sfiA | AAB86996.1 | reverse transcriptase-like protein | Not tested | SHI-1 | Protein | 6e-148 | 70 |
| SF2976 | NP_708749.1 | reverse transcriptase-like protein | Not tested | SHI-1 | Protein | 6e-167 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Arad_9956 | YP_002542478.1 | reverse transcriptase/maturase | VFG0639 | Protein | 2e-167 | 67 |
