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Name : dctD (Arad_9212) Accession : YP_002541898.1 Strain : Genome accession: NC_011983 Putative virulence/resistance : Virulence Product : two-component response regulator protein regulating C4-dicarboxylate transport system Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 1916623 - 1917561 bp Length : 939 bp Strand : + Note : - DNA sequence : CTGCCGCTGATCGGCCAGACGGCGGCGATGGAGCGGCTGCGCCACACATTGCGGCAGATCGCCGATACCGACGTCGACGT GCTGGTGACCGGCGAAACCGGCAGCGGCAAGGAAGTGGTCGCAAGCCTGCTGCATCGCTGGAGCCGGCGGGCAAAGGGCA ATTTTGTCGCGCTCAATTGCGGCGCCCTGCCGGAAACCGTCATCGAAAGCGAGCTCTTCGGCCACGAGCCCGGCGCTTTC ACCGGCGCGCAGAAGAAGCGCATCGGCCGCATCGAACATGCAAGCGCCGGCACGCTGTTTCTCGACGAAATCGAGAGCAT GCCGCCCGCTGTGCAGGTGCAGCTGCTGCGTGTGCTGGAAATGCGGGAAGTCACGCCGCTCGGCACCAACGAGGTACGCC CCGTCGACCTTCGTGTCGTGGCGGCCGCCAAGGTCGATCTTGGCGATCCGCGCCAGCGCGGCGATTTTCGCGAGGACCTT TATTACCGCCTCAACGTCGTCACCATCTCCATCCCGCCGCTGCGCGACCGGCGTGACGATATTCCGCTTCTCTTCGGCTA CTTCGCGGAGCGTGCCGCCAGCCGCTTCAAGCGCGACGTGCCGACCATGTCCACCGCCATTCGCCGCCACTTGCAGCACC ATGACTGGCCGGGCAATGTTCGCGAGCTGTCGCACTTCGCCGAACGTTTCGTCCTGGGCCTGGAATCTGCGGCAGGCTCG AAGCCGGGCGAAACCCCTTCCACCGACACAGTGTTGCCCCTGCCCGCCCGCGTCGAGCGCTATGAGGCGGACCTGATCCG CGAAACGCTTGCCCAAAATGGCGGCGATGTCCGCCGGACGATCGAGGCGCTCGGCATCCCGCGCAAGACCTTTTACGACA AGCTTCAGCGCCATGGCATTGTCCGTAGCGAATTTGCGGGTTTTGATGGCGAGGACTAG Protein sequence : MPLIGQTAAMERLRHTLRQIADTDVDVLVTGETGSGKEVVASLLHRWSRRAKGNFVALNCGALPETVIESELFGHEPGAF TGAQKKRIGRIEHASAGTLFLDEIESMPPAVQVQLLRVLEMREVTPLGTNEVRPVDLRVVAAAKVDLGDPRQRGDFREDL YYRLNVVTISIPPLRDRRDDIPLLFGYFAERAASRFKRDVPTMSTAIRRHLQHHDWPGNVRELSHFAERFVLGLESAAGS KPGETPSTDTVLPLPARVERYEADLIRETLAQNGGDVRRTIEALGIPRKTFYDKLQRHGIVRSEFAGFDGED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpR | AAC35799.1 | transcriptional regulator | Virulence | Hrp PAI | Protein | 3e-51 | 45 |
| hrpS | AAT96161.1 | HrpS | Virulence | T-PAI | Protein | 3e-50 | 44 |
| hrpS | AAT96215.1 | HrpS | Virulence | T-PAI | Protein | 3e-50 | 44 |
| hrpR | AAT96162.1 | HrpR | Virulence | T-PAI | Protein | 5e-52 | 44 |
| hrpR | AAT96216.1 | HrpR | Virulence | T-PAI | Protein | 5e-52 | 44 |
| hrpR | NP_791206.1 | type III transcriptional regulator HrpR | Virulence | Hrp PAI | Protein | 8e-52 | 44 |
| hrpR | AAC34752.1 | HrpR | Virulence | Hrp PAI | Protein | 6e-52 | 44 |
| hrpS | AAC34753.1 | HrpS | Virulence | Hrp PAI | Protein | 2e-48 | 43 |
| hrpS | NP_791207.1 | type III transcriptional regulator HrpS | Virulence | Hrp PAI | Protein | 8e-50 | 43 |
| hrpRS | ABA47311.1 | HrpRS | Virulence | S-PAI | Protein | 9e-53 | 42 |
| hrpR | ABQ88368.1 | HrpR | Virulence | Hrp PAI | Protein | 2e-48 | 42 |
| hrpR | AAA17651.1 | positive regulatory factor | Not tested | Hrp PAI | Protein | 2e-48 | 42 |
| unnamed | AAT96283.1 | HrpS/HrpR-like protein | Not tested | S-PAI | Protein | 8e-53 | 41 |
| unnamed | AAT96324.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 8e-53 | 41 |
| hrpS | ABQ88367.1 | HrpS | Virulence | Hrp PAI | Protein | 2e-47 | 41 |
| hrpS | AAA17650.1 | positive regulatory factor | Not tested | Hrp PAI | Protein | 2e-47 | 41 |
| hrpS | AAC35800.1 | transcriptional regulator | Virulence | Hrp PAI | Protein | 2e-46 | 41 |
