Gene Information

Name : Arad_9136 (Arad_9136)
Accession : YP_002541838.1
Strain :
Genome accession: NC_011983
Putative virulence/resistance : Virulence
Product : aliphatic sulfonates ABC transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 1847569 - 1848207 bp
Length : 639 bp
Strand : -
Note : -

DNA sequence : 
GTGTTCGACATCGTCAAGGAATACGAGGTTCATGGTCGCATGCGGCGCGTGCTTGATGGTATCAATTTCAAGATCTCGCG
CGGGGAGAAGATCGCTGTCCTCGGCCACAACGGCGCCGGTAAATCCACCCTTGTGCGTCTGATCGCCGGGATAGAGGAAC
CTACCTCGGGCAAGATCGTGCGCAGCATGTCCATGTCCTGGCCCATCGCGCTCAGCGGCGGCTTCGGCGGATCGATGACG
GGCTACGACTGCATGCGGTTTCTGTCGCGCGTCTATGACAAGCCTTTCGATGAAATCCGCGACATGGTGGAGGATTTCAG
CGACCTCGGCAAATATCTGCGCATGCCGCTCAAGACCTATTCGTCCGGCATGCGCGCGCGACTGGCCTTCGGCATGTCGC
TTGCCATCGACTTTGACTGCTATCTCATCGACGAGGTGATGGCGGTCGGCGACAAACGGTTTCAGACCCGTTCTTTCGAG
GAACTTTTCGTCAAGCGGAAGGACCGCTCGATGATCGTCGTCGGCCATAACTTAAATGTGATCGCCGATATCTGCACCTC
TGCACTGGTCCTGAAGAATGGTCGCGGCCGCGTTTTCGACGATGTCGAGTATGCTTTCCGTATCTATTCGACACTCTGA

Protein sequence : 
MFDIVKEYEVHGRMRRVLDGINFKISRGEKIAVLGHNGAGKSTLVRLIAGIEEPTSGKIVRSMSMSWPIALSGGFGGSMT
GYDCMRFLSRVYDKPFDEIRDMVEDFSDLGKYLRMPLKTYSSGMRARLAFGMSLAIDFDCYLIDEVMAVGDKRFQTRSFE
ELFVKRKDRSMIVVGHNLNVIADICTSALVLKNGRGRVFDDVEYAFRIYSTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 1e-52 53
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 2e-40 45
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 7e-40 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arad_9136 YP_002541838.1 aliphatic sulfonates ABC transporter VFG0258 Protein 4e-53 53
Arad_9136 YP_002541838.1 aliphatic sulfonates ABC transporter VFG0696 Protein 2e-51 53
Arad_9136 YP_002541838.1 aliphatic sulfonates ABC transporter VFG2563 Protein 1e-49 49
Arad_9136 YP_002541838.1 aliphatic sulfonates ABC transporter VFG1449 Protein 7e-41 45