Gene Information

Name : Arad_8385 (Arad_8385)
Accession : YP_002541268.1
Strain :
Genome accession: NC_011983
Putative virulence/resistance : Unknown
Product : proline/glycine betaine ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 1217136 - 1218074 bp
Length : 939 bp
Strand : -
Note : -

DNA sequence :
ATGATACGACTCGACCATGTCACCAAGAACTATGAGGGAAGCGAGCGCCACGCCGTCGACACCCTCGAGCTTGAGATCGA
AACGGGCACGACCGTCGCGCTGATCGGCCCCTCGGGCTGCGGCAAGACGACGACCATGCGAATGATCAACCGGCTGGAAA
CGCCGACGCGCGGCCGCGTGCTGGTCAATGGACGGGATGTGGCGGAGACCGATCAGAAGCAGCTTCGCCGCAGCATCGGC
TACGTCATCCAGCAGGTCGGGCTTTTCCCGCATATGACGATCGAGCGCAATGTCGCGACGGTGCCGCGCCTGCTCGGCTG
GGACAAGGCAAGGACGGACCGCCGCATCGACGAGCTTCTCGATCTGGTCGGCCTCGATCCGGCGATCATGCGCCGCCGCC
TGCCGCACGAGCTTTCCGGCGGACAGCGGCAGCGGGTCGGCTTTGCCCGGGCGCTCGCCGCCGATCCCGCCATCATGCTG
ATGGACGAGCCCTTCGGCGCGATCGATCCCATCACCCGCGTGCGGCTGCAGGACGAATTCCGGCAGATTCTGAAAAAAGT
CAGCAAGACTGTGGTCATCGTCACCCACGACATCGACGAGGCGATCAAGATGGGCGACCGCATCGCTATCATGCGCGACG
GCCGCCTGCTGCAATATGATACGCCGGAAGCGATCCTCGCCCGTCCCGCCAACAACTTCGTGGAAAGCTTCCTCGGACCG
GACCGGGCAATCAAGCGCCTGAGCCTGATCGAGGTGGCAAGCGTCATGGCGCCGCCCGCAACTGAGGTTTCCGCTGTCTC
CATCGGCCCCAGTGCCAGTCTCCATGATGCGCTGGCGCTGATCCTTGCCGATGACCTGCAGGGTCTCGATGTCAAGGCGG
AGAGTGGTGAGAGAGTTGGGTATCTGTCGCGCGAGGCGGTGCTTTCCGCACATCGGTAG

Protein sequence :
MIRLDHVTKNYEGSERHAVDTLELEIETGTTVALIGPSGCGKTTTMRMINRLETPTRGRVLVNGRDVAETDQKQLRRSIG
YVIQQVGLFPHMTIERNVATVPRLLGWDKARTDRRIDELLDLVGLDPAIMRRRLPHELSGGQRQRVGFARALAADPAIML
MDEPFGAIDPITRVRLQDEFRQILKKVSKTVVIVTHDIDEAIKMGDRIAIMRDGRLLQYDTPEAILARPANNFVESFLGP
DRAIKRLSLIEVASVMAPPATEVSAVSIGPSASLHDALALILADDLQGLDVKAESGERVGYLSREAVLSAHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-54 52
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 9e-55 52