Gene Information

Name : Arad_8352 (Arad_8352)
Accession : YP_002541244.1
Strain :
Genome accession: NC_011983
Putative virulence/resistance : Virulence
Product : zinc ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 1191172 - 1192017 bp
Length : 846 bp
Strand : +
Note : -

DNA sequence : 
ATGAATGCTCTATCCACCCTGCTGGGACCGTTCCAGTTCGACTTCATGGTCAACGCCTTGATCATCTCTGTACTGATTGC
GGTGCCGACGGCGCTGCTGTCTTGCTTCCTGGTGCTCAAGGGTTGGGCTCTCATGGGAGACGCCATGAGCCATGCGGTGT
TTCCGGGTGTGGTCATCGCCTATATCGTCGGCTTTCCCCTGGCGGTCGGCGCCTTTGCCGCCGGCATGGTCTGCGCTCTT
GCGACCGGCTTCCTCAAAGACAACAGCCGCATCAAGCAGGATACGGTGATGGGCATCGTGTTCTCGGGCATGTTCGGGTT
CGGTCTGGTCCTCTATGTGAAAATCCAGTCCGAGGTGCATCTCGACCATATCCTGTTTGGCGACATGCTCGGAATCGGAT
GGCAGGACATCATGGAAACCGCGGCCGTTGCGGTGCTGGCGGCGGCCGTCATCGCGGTCAAGTGGCGTGACCTGCTGCTG
CATGCCTTTGACCCGGCGCAGGCAAGGGCAGTCGGTCTAAGGGTCAACCTGCTGCACTATGGTCTGCTCTGCCTGCTATC
GCTGACGATCGTGGCGACGCTGCAGTCGGTGGGCATCATTCTCGCCATCTCCCTGCTGATCGCGCCCGGTGCCATCGCCT
ATCTATTGGCGCGCAGGTTCAGCGTCATGCTCGTTCTATCGGTGGTGATTGCGGTGACGGCAGCATTTTCCGGCGTCTAT
CTGTCCTTCTTCATCGACAGTGCACCGGCTCCAACCATCGTGCTGCTGCTCGCCATCACTTTCGTCGGCGCTTTCCTCTA
TGCCTCTCGCAAGGCGGTGCGGACGGAAGCACACGAGACGGCGTAG

Protein sequence : 
MNALSTLLGPFQFDFMVNALIISVLIAVPTALLSCFLVLKGWALMGDAMSHAVFPGVVIAYIVGFPLAVGAFAAGMVCAL
ATGFLKDNSRIKQDTVMGIVFSGMFGFGLVLYVKIQSEVHLDHILFGDMLGIGWQDIMETAAVAVLAAAVIAVKWRDLLL
HAFDPAQARAVGLRVNLLHYGLLCLLSLTIVATLQSVGIILAISLLIAPGAIAYLLARRFSVMLVLSVVIAVTAAFSGVY
LSFFIDSAPAPTIVLLLAITFVGAFLYASRKAVRTEAHETA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 7e-83 73
sitD NP_461785.1 permease Virulence SPI-1 Protein 9e-83 73
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-82 72
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-82 72
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-82 72

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arad_8352 YP_002541244.1 zinc ABC transporter BAC0352 Protein 4e-83 73
Arad_8352 YP_002541244.1 zinc ABC transporter BAC0442 Protein 3e-61 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arad_8352 YP_002541244.1 zinc ABC transporter VFG0528 Protein 4e-83 73