Gene Information

Name : znuB (Arad_8351)
Accession : YP_002541243.1
Strain :
Genome accession: NC_011983
Putative virulence/resistance : Virulence
Product : zinc uptake ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 1190315 - 1191175 bp
Length : 861 bp
Strand : +
Note : -

DNA sequence : 
CTGATGGCCTCCCTTCTCGAACCCTTCGGCTATAATTACATGCTCAACGCCATGTGGGTTTCGGCGCTGGTCGGCGCGGT
CTGTGCGTTTCTCTCTTGCTTCCTGATGTTGAAGGGCTGGTCGCTGATCGGCGATGCGCTGTCTCACTCGATCGTGCCCG
GCGTTGCCGGCGCGTATATGCTCGGACTTCCCTTTTCGATCGGCGCCTTCTTTTCCGGCGGGCTTGCGGCGGCGGCGATG
CTGTTCCTGAACCAGCGGACGAAACTGAAGGAAGACGCCATCATCGGGCTGATCTTCTCCTCCTTCTTCGGGCTTGGCCT
GTTCATCGTTTCGCTCAAGCCCGCGGCGGTAAACATTCAGACCATCGTGCTCGGCAATATCCTTGCCATCACGCCGGAGG
ACACGCTCCAGCTCGCCATTATCGGCTTCGTTTCGCTCGCCATCCTGCTGGTGAAATGGAAGGACCTGATGGTGACATTC
TTCGACGAGACCCATGCCCGTTCGATCGGCCTCAATCCGACAGCACTCAAGATCCTGTTCTTCACGCTGCTCTCGGCGTC
GACGGTCGCAGCACTTCAGACGGTTGGCGCCTTTCTGGTGATCTGCATGGTGGTGACCCCCGGAGCGACAGCCTATCTGC
TGACGGATCGCTTCCCACGGCTGCTCATCATTGCGGTCGCGATCGGGGCAGTGACCAGCTTCGTCGGCGCTTATGCGAGT
TATTTTCTCGATGGCGCCACCGGCGGCATCATCATCGTGCTCCAGACGCTGATCTTCCTCGTCGCCTTCTTTTTCGCACC
CAAGCACGGCATGCTGGCAGCCCGACGCAGGGCGGCGGAAGGGCGGGAGGTGACACCATGA

Protein sequence : 
MMASLLEPFGYNYMLNAMWVSALVGAVCAFLSCFLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFSIGAFFSGGLAAAAM
LFLNQRTKLKEDAIIGLIFSSFFGLGLFIVSLKPAAVNIQTIVLGNILAITPEDTLQLAIIGFVSLAILLVKWKDLMVTF
FDETHARSIGLNPTALKILFFTLLSASTVAALQTVGAFLVICMVVTPGATAYLLTDRFPRLLIIAVAIGAVTSFVGAYAS
YFLDGATGGIIIVLQTLIFLVAFFFAPKHGMLAARRRAAEGREVTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-83 82
sitC NP_461784.1 permease Virulence SPI-1 Protein 1e-83 82
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-83 82
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-83 82
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-83 82
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-38 41
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-38 41
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-38 41
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
znuB YP_002541243.1 zinc uptake ABC transporter BAC0351 Protein 6e-84 82
znuB YP_002541243.1 zinc uptake ABC transporter BAC0441 Protein 9e-70 71
znuB YP_002541243.1 zinc uptake ABC transporter BAC0442 Protein 8e-33 42
znuB YP_002541243.1 zinc uptake ABC transporter BAC0352 Protein 7e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
znuB YP_002541243.1 zinc uptake ABC transporter VFG0527 Protein 6e-84 82
znuB YP_002541243.1 zinc uptake ABC transporter VFG0528 Protein 7e-39 41