Gene Information

Name : Arad_8350 (Arad_8350)
Accession : YP_002541242.1
Strain :
Genome accession: NC_011983
Putative virulence/resistance : Virulence
Product : zinc ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1189479 - 1190318 bp
Length : 840 bp
Strand : +
Note : -

DNA sequence : 
ATGAACGCGGTCGCCACCCGCATCTCCCCAGCACCTGCGGATGCGGGGGGCGGCATTTTCGTGAAGGATGCCACCGTCAC
CTATCGCAACGGCCATACGGCACTGCGCGATGCCAGCTTCAAGGTGCCAGAAGGCACCATCACAGCACTGGTCGGCGTCA
ATGGCTCCGGCAAATCAACGCTCTTCAAGGCGATCATGGGTTTCGTGCGTCTGGCAAAGGGCGAGATTTCGGTCTTGGGA
ATGCCGGTCAAACAGGCGCTGCGGCAAAATCTCGTGGCCTATGTACCGCAGGCGGAAGAGGTCGACTGGAATTTCCCGGT
CCTGGTCGAGGATGTCGTCATGATGGGTCGCTATGGCCATATGGGCATGATGCGGATTGCGAAGGCGCCCGATCATGAAG
CCGTATCCAGGGCGCTTGCGCGCGTCGACATGAGCGAATTCCGCAAACGCCAGATCGGCGAATTGTCCGGCGGGCAGAAG
AAACGCGTCTTCCTGGCTCGTGCTCTGGCGCAGGACAGCCGCGTCATCCTGCTCGATGAGCCCTTCACCGGCGTCGACGT
GAAGACCGAGGAAGCCATTGTCAAACTGTTGCGCTCGCTGCGCGACGATGGCCGGGTGATGTTGGTCTCGACGCACAATC
TCGGCTCCGTGCCGGAGTTCTGCGATCGCACCGTGCTCATCAAGGGCACGGTGCTCGCCTATGGGCCGACCGACGAGACC
TTCACGCAGGAGAACCTCGAAAGGACCTTCGGCGGCGTGCTTCGCCATTTCGTGCTCGACGGCCCGGCTGGCAAGCCGCC
GGCGCGTGCCTCTGTGAACGAGCATGGAGAGCGTGTCTGA

Protein sequence : 
MNAVATRISPAPADAGGGIFVKDATVTYRNGHTALRDASFKVPEGTITALVGVNGSGKSTLFKAIMGFVRLAKGEISVLG
MPVKQALRQNLVAYVPQAEEVDWNFPVLVEDVVMMGRYGHMGMMRIAKAPDHEAVSRALARVDMSEFRKRQIGELSGGQK
KRVFLARALAQDSRVILLDEPFTGVDVKTEEAIVKLLRSLRDDGRVMLVSTHNLGSVPEFCDRTVLIKGTVLAYGPTDET
FTQENLERTFGGVLRHFVLDGPAGKPPARASVNEHGERV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-81 75
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-81 75
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-81 74
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-81 74
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-81 74

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arad_8350 YP_002541242.1 zinc ABC transporter BAC0350 Protein 1e-81 74
Arad_8350 YP_002541242.1 zinc ABC transporter BAC0440 Protein 4e-72 64
Arad_8350 YP_002541242.1 zinc ABC transporter BAC0400 Protein 7e-44 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arad_8350 YP_002541242.1 zinc ABC transporter VFG0526 Protein 1e-81 74