Gene Information

Name : Arad_8348 (Arad_8348)
Accession : YP_002541241.1
Strain :
Genome accession: NC_011983
Putative virulence/resistance : Virulence
Product : zinc ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1188553 - 1189482 bp
Length : 930 bp
Strand : +
Note : -

DNA sequence : 
ATGTTTGATCGCGCCCGACGCAGGGTCCTTGCGGGATTGGCAGGTTTCGCGGCACTCGGCCTGATGGCAGGCGGTGTGGC
AGCTGAGGAGGCAGCCAATCAGAAGTTCAAGGCGGTGACGACCTTCACGGTTATCGCCGACATGGCGAAGAATGTAGCGG
GCGACGCTGCCATAGTGGAATCGATCACCAAGCCCGGCGCCGAGATCCATGAATATCAGCCGACGCCCCGCGACATCCAG
CGGGCGCAGGGCGCCCAGCTTCTCTTCTCGAACGGTCTCAATCTCGAACTCTGGTTCCAGAAGTTCTATCGGCACCTGAA
GGACGTTCCCGACGTCGTGGTCTCGACCGGCGTCGAGCCGATGGGCATCACGGAAGGCCCCTATAACGGTAAACCCAATC
CGCATGCCTGGATGTCGCCGAAGAATGCGATCATCTATGTCGACAATATCCGCGACGCCTTCGTCAAATACGACCCGAAG
AACGCCGAGATCTACAAGGCCAATGCGGAGGCCTACAAGACGAAGATCGCGGCAACCATCGCGCCGATCCGCGAGAAGCT
GGATACCATTCCGGAAGACAAGCGCTGGCTGGTTTCGAGCGAAGGCGCCTTTTCCTACCTGGCTCGTGATTTTGGCCTGA
AAGAACTCTATCTCTGGCCGATCAATGCCGACCAGCAAGGCACCCCGCAGCAAGTGCGCAAGGTGGTCGATACTATGAGT
GTCAACAAGATCAGCGCGGTTTTCAGCGAGAGTACCATCTCCGACAAGCCGGCCCGGCAGGTCGCACGCGAGACCGGCAC
CCATTATGGCGGCGTGCTCTATGTCGACTCCCTGAGCGAGGCCGATGGGCCGGTGCCGACCTATGTCGACCTCCTGCGCG
TCACCTCCGACACCGTGGCGAAGGGGCTGGCCGAGGGGCTGTCGCAATGA

Protein sequence : 
MFDRARRRVLAGLAGFAALGLMAGGVAAEEAANQKFKAVTTFTVIADMAKNVAGDAAIVESITKPGAEIHEYQPTPRDIQ
RAQGAQLLFSNGLNLELWFQKFYRHLKDVPDVVVSTGVEPMGITEGPYNGKPNPHAWMSPKNAIIYVDNIRDAFVKYDPK
NAEIYKANAEAYKTKIAATIAPIREKLDTIPEDKRWLVSSEGAFSYLARDFGLKELYLWPINADQQGTPQQVRKVVDTMS
VNKISAVFSESTISDKPARQVARETGTHYGGVLYVDSLSEADGPVPTYVDLLRVTSDTVAKGLAEGLSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-103 76
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-103 76
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-103 76
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-103 76
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 8e-104 76

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arad_8348 YP_002541241.1 zinc ABC transporter BAC0349 Protein 5e-104 76
Arad_8348 YP_002541241.1 zinc ABC transporter BAC0439 Protein 2e-90 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arad_8348 YP_002541241.1 zinc ABC transporter VFG0525 Protein 4e-104 76