Gene Information

Name : Avi_8266 (Avi_8266)
Accession : YP_002540136.1
Strain :
Genome accession: NC_011982
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 198912 - 199241 bp
Length : 330 bp
Strand : -
Note : -

DNA sequence :
ATGACAAGCAAGACAACAAACAAATTTTCATCTGAAGTTCGGGCCCGAGCGGTGCGGCTTGTTTTGGACCATGAAGCCGA
ACATCCGTCCCGTTGGGCCGCGATCTCATCGATAGCGGCCAAAATAGGCTGTGCGCCGCATACACTCCATGAGTGGGTCA
AAAAGGCTGAGGTGGATACTGGTAAGCGGGCTGGATTGCGGAGCGATGTGGTTGAGAAGATGAAGGCTCTTGAGCGGGAG
AACCGCGAGCTTCGTCAGGCCAACGAGATTTTGCGCAAGGCATCTGCTTATTTCGCCCAGGCGGAGCTCGACCGCCCACT
GAAGCGATGA

Protein sequence :
MTSKTTNKFSSEVRARAVRLVLDHEAEHPSRWAAISSIAAKIGCAPHTLHEWVKKAEVDTGKRAGLRSDVVEKMKALERE
NRELRQANEILRKASAYFAQAELDRPLKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 2e-22 58
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 2e-22 58
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 3e-24 58
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 3e-24 58
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 3e-24 58
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 3e-24 58
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 2e-22 58
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 1e-20 57
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 4e-24 57
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 4e-24 57
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 4e-24 57
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 5e-24 57
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 4e-24 57
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-19 56
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 2e-19 56
unnamed AAF09023.1 unknown Not tested SHI-O Protein 4e-21 56
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-21 56
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 4e-21 56
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-21 56
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 4e-21 56
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 5e-21 56
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 4e-21 56
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 5e-21 56
S4062 NP_839231.1 IS629 orfA Not tested SHI-2 Protein 3e-19 56
SF3706 NP_709445.1 IS629 ORF1 Not tested SHI-2 Protein 4e-20 55
unnamed AAL67404.1 R13-like protein Not tested PAI II CFT073 Protein 7e-19 55
c3596 NP_755471.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-18 55
c5177 NP_757025.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-18 55
r13 AAC61722.1 R13 Not tested PAI I CFT073 Protein 7e-19 55
ECUMN_3344 YP_002414020.1 transposase ORF A, IS629 Not tested Not named Protein 1e-18 55
CDCE8392_1959 YP_005134490.1 hypothetical protein Not tested Not named Protein 9e-13 43
CDC7B_2036 YP_005163477.1 hypothetical protein Not tested Not named Protein 9e-12 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Avi_8266 YP_002540136.1 hypothetical protein VFG1603 Protein 5e-21 57
Avi_8266 YP_002540136.1 hypothetical protein VFG0643 Protein 1e-21 56
Avi_8266 YP_002540136.1 hypothetical protein VFG0606 Protein 1e-20 55
Avi_8266 YP_002540136.1 hypothetical protein VFG1717 Protein 3e-19 55