Gene Information

Name : Avi_8237 (Avi_8237)
Accession : YP_002540116.1
Strain :
Genome accession: NC_011982
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 174077 - 174439 bp
Length : 363 bp
Strand : -
Note : -

DNA sequence :
GTGCGTGGAGGCGGCATGATCGAGCCTTCTGGGAATGTGCGGGTCTATCTAGCCTGCGGAGTGACCGACATGCGGCGTGG
CATTGATGGGCTTTCGGCGCTGGTTGAGACGGTCGTAAAGGAGGCACCGGGCTCGGGTGCGATCTTCGGCTTCCGCGGAA
AACGCGCCGATCGGATCAAGCTTCTCTGGTGGGATGGCCAAGGGTTTTGCCTATTTTACAAGGTTCTTGAACGCGGATAC
TTTCCCTGGCCGAGGGCGAAAGAAGGCGTTGCGCCCCTGACGCAGGCGCAGCTCTCGATGCTTGTGGAAGGGATCGACTG
GCGCCGGCCAGCGTGGACTTCGGCTCCGGCGAGAACGGGCTAA

Protein sequence :
MRGGGMIEPSGNVRVYLACGVTDMRRGIDGLSALVETVVKEAPGSGAIFGFRGKRADRIKLLWWDGQGFCLFYKVLERGY
FPWPRAKEGVAPLTQAQLSMLVEGIDWRRPAWTSAPARTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 3e-21 54
unnamed AAL99258.1 unknown Not tested LEE Protein 3e-24 53
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-24 53
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 3e-24 53
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 4e-24 53
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 4e-24 53
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 4e-24 53
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 3e-23 53
unnamed AAL08461.1 unknown Not tested SRL Protein 4e-24 53
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 3e-23 53
unnamed AAC31493.1 L0014 Not tested LEE Protein 3e-24 53
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 3e-24 53
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-23 52
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-23 52
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 5e-22 50
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 2e-24 50
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 9e-25 50
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 9e-25 50
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 5e-22 50
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 5e-16 48
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 3e-22 48
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 3e-22 48
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 4e-22 46
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 4e-21 45
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 4e-21 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Avi_8237 YP_002540116.1 transposase VFG0792 Protein 1e-24 53
Avi_8237 YP_002540116.1 transposase VFG1052 Protein 2e-24 53
Avi_8237 YP_002540116.1 transposase VFG1709 Protein 1e-24 53
Avi_8237 YP_002540116.1 transposase VFG1698 Protein 3e-24 52
Avi_8237 YP_002540116.1 transposase VFG1665 Protein 8e-25 50
Avi_8237 YP_002540116.1 transposase VFG1517 Protein 2e-16 48
Avi_8237 YP_002540116.1 transposase VFG1737 Protein 1e-22 46