Gene Information

Name : Avi_8183 (Avi_8183)
Accession : YP_002540084.1
Strain :
Genome accession: NC_011982
Putative virulence/resistance : Unknown
Product : ABC transporter ATPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 128400 - 130190 bp
Length : 1791 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGAGCACGCTGTACTTTCAGTCAAAAATCTCAAGATCTCATTCGGCAGCAAGCCGATCGTCCACGATCTCAGCTT
CGATATTGCCGCCGGCTCGACCCTGGCGGTTGTCGGTGAATCCGGATCGGGAAAGAGCGTCACCTCACTGGCGATTATGG
GCCTTCTGCCCGAAGGCACCGCCAAGGTGAGCGGGTCGATCCGCCTTAATGGCAAAGAATTGCTCGATCTGCCTGAAGCA
GAGATGCGCCAGATCAGGGGTGGCAAGATCAGCATGATCTTCCAGGAACCGATGACGTCACTCAATCCTGTCCAGCGCGT
CGGAGATCAAATCGCCGAAGCCATCCGGATTCACCGGGGATTGAAGGGGCGGGGCCTTCGCGACGCGGTTCTGGAAATGC
TTAAAAAGGTCGGTATCCCCGACCCGGAACGCCGGATTGACAACTATCCGCACATGTTCTCCGGCGGGATGCGCCAGCGC
GTGATGATTGCCATGGCTCTGGCTTGCGATCCCGCATTGATCATAGCCGACGAGCCGACCACCGCACTTGACGTTACCGT
TCAGGCGCAGATCCTTCAACTTTTGAAAGATCTACAGCAGGACACGAAGACCGCCGTCTTGTTCATCACGCATGATATGG
GCGTTGTCGCCGAAGTCGCCGATCAGGTCCTGGTCATGCGAGGCGGTCACCAAATCGAAGCAGATTCGGTCAACAAAATC
TTCACCGAGCCGGAAAGCGAATATACCCGGATTCTGATCGAAGCAGCACCCTCGATTGCGGGTAAAATCGATATCGAAAA
TGCGGCAGCGTCAGAACTCGACGTCCTTCCGCTCAACTGCAAAGGTGACAAGCCCCTTCTTGAGGTGCGTGATCTCTCGG
TTAGATTTGTCCATACCGGCGGGTTGCTTGGCCGCAGACTGGGCCATGTCCATGCTGTGGAAGGTGTCTCGTTCGCGATC
GGTAAGGGTGAGACGCTCGGCCTTGTCGGGGAGTCGGGCTCCGGGAAGTCAACGATCGGCAAGGCTATCATCGATCTCGT
ATCGCGGCATGGCGGCACGATCACGGTCGACGGCAACGTGATCGACTATTCCAATCCTAAAAGTCTGGCGCGCTTGCGCC
GTGACGTCCAGATGATCTTCCAGGATCCATTTGGGTCGCTCGACAGTCGACAGACTATTGGCTCGGCGATTATCGAGCCG
ATGAAAGTACACGGGATTGCAACCGGCAAAGCGCTGACCGAGAAAATGGAGTGGCTGCTCGACAAAGTCGGTATCTCTCC
CGATCGCGCCAAGAGCCTGCCCCATGAATTCTCCGGCGGCCAGCGCCAGCGCATCTGCATCGCGCGGGCGCTCGCAATGG
CACCGAAGCTGATTATCGCCGACGAAGCTGTTTCTGCTCTCGATGTTGCCGTCAAAGCGCAGATCATCGAGCTTATGATG
AACCTGCAGAAGGAATTCGACATTTCGTATCTGTTCATCAGCCACGACATGGCCGCCGTAGAGAAAATCTGTGATCGGGT
TGCCGTTATGTACTTTGGTGAACTGGTTGAAATCGGCAGCAGGGATGACGTAATCGGGCGCCCTGGCCATGCCTATACCC
AGCGCTTGCTTTCCGCCATTCCGATTACCCATCCGGATCAACGGCTGGATCGACCGGCGGCAAAGCGCGAGGCGCCGCCA
CCACGCAGCCCGATGAAGCCCATCGGTTTCGCACCGGAACCAGCGCTTTGGAATATGAAAAGCGACGGGCATTTCGTCCG
CCGCACCGCGCCATTGCTCAGCCCTCGGTGA

Protein sequence :
MSEHAVLSVKNLKISFGSKPIVHDLSFDIAAGSTLAVVGESGSGKSVTSLAIMGLLPEGTAKVSGSIRLNGKELLDLPEA
EMRQIRGGKISMIFQEPMTSLNPVQRVGDQIAEAIRIHRGLKGRGLRDAVLEMLKKVGIPDPERRIDNYPHMFSGGMRQR
VMIAMALACDPALIIADEPTTALDVTVQAQILQLLKDLQQDTKTAVLFITHDMGVVAEVADQVLVMRGGHQIEADSVNKI
FTEPESEYTRILIEAAPSIAGKIDIENAAASELDVLPLNCKGDKPLLEVRDLSVRFVHTGGLLGRRLGHVHAVEGVSFAI
GKGETLGLVGESGSGKSTIGKAIIDLVSRHGGTITVDGNVIDYSNPKSLARLRRDVQMIFQDPFGSLDSRQTIGSAIIEP
MKVHGIATGKALTEKMEWLLDKVGISPDRAKSLPHEFSGGQRQRICIARALAMAPKLIIADEAVSALDVAVKAQIIELMM
NLQKEFDISYLFISHDMAAVEKICDRVAVMYFGELVEIGSRDDVIGRPGHAYTQRLLSAIPITHPDQRLDRPAAKREAPP
PRSPMKPIGFAPEPALWNMKSDGHFVRRTAPLLSPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-95 42
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-76 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-76 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 7e-76 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-76 41