Gene Information

Name : Avi_7114 (Avi_7114)
Accession : YP_002539538.1
Strain :
Genome accession: NC_011981
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3316
EC number : -
Position : 94454 - 95137 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence :
ATGGTCGATTTCAAAGGCAGTCACTACCCGAAAGAAGTGATTTTATACGCCTTATTTTTCTATGTCCGATATGCAGTTTC
CTACCGCGACCTGGAAGAGATTATGGCCGAACGCGGGGTCAATCTCGACCACGCGACACTGAATAGATGGGTCGTGAAAT
ACGCGCCGCTGATTGCCCTGCAAGCGAAGCGCCGGAAATCCAAACCCAGCGGCTCCTGGCGAATGGGTGAGACGTACATC
GAGGTCAAAGGCCAGTGGATGTACTTTTATCGCGCCGTTGACAAGCATGGCAAAACCCTTGATTTCATGCTATCCGAGCA
TCGCGATGAGGCCGCCGCTACCGATTTCTTCGCCCGCACCATCGAGAACAATGGTTGGCCCGAAAAGGTTGTCATCGACA
AAAGCGGGGCGAACTTGGCAGGGCTGCAAAACATGAATATTCTGCTGCTATTGCATGGCTGGTTCTGGCTGATCGAAGTT
CTGCAAGTCAAATATCTCAACAACATGATTGAGCAGGATCACCGCTTTATTAAGAAACTGACCAGGCCAATGAAGGGCTT
CAAACGCTTTCAGTCCGCATCAGCGACACTGGACGGCATCGAAGTCGCACATATGATCCGCAAGAAACAGTTTTCCACCA
GCGTCCAATCGCCATTTCAACAGTTCTCGGCACTCGCCACATAA

Protein sequence :
MVDFKGSHYPKEVILYALFFYVRYAVSYRDLEEIMAERGVNLDHATLNRWVVKYAPLIALQAKRRKSKPSGSWRMGETYI
EVKGQWMYFYRAVDKHGKTLDFMLSEHRDEAAATDFFARTIENNGWPEKVVIDKSGANLAGLQNMNILLLLHGWFWLIEV
LQVKYLNNMIEQDHRFIKKLTRPMKGFKRFQSASATLDGIEVAHMIRKKQFSTSVQSPFQQFSALAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA6100 ACN62081.1 TnpA6100 Not tested SGI1 Protein 2e-33 43
tnpA6100 ACN81001.1 transposase Not tested AbaR5 Protein 2e-33 43
tnpA6100 AGK07076.1 IS6100 transposase Not tested SGI1 Protein 4e-34 43
tnpA6100 AGF35067.1 IS6100 transposase Not tested SGI1 Protein 2e-33 43
tnpA6100 AGK06937.1 IS6100 transposase Not tested SGI1 Protein 2e-33 43
tnpA6100 AGK06983.1 IS6100 transposase Not tested SGI1 Protein 2e-33 43
tnpA6100 AGK07042.1 IS6100 transposase Not tested SGI1 Protein 2e-33 43
tnpA6100 AGK07113.1 IS6100 transposase Not tested SGI1 Protein 2e-33 43
tnpA AAG03007.1 transposase Not tested SGI1 Protein 2e-33 43
tnp6100 ACS32049.1 Tnp6100 Not tested SGI2 Protein 2e-33 43
tnp6100 ACX47960.1 tnp6100 Not tested SGI1 Protein 4e-34 43
tnpA6100 AGF34993.1 IS6100 transposase Not tested SGI1 Protein 2e-33 43
CDBH8_0916 YP_005160008.1 transposase-like protein Not tested Not named Protein 2e-33 43
tnpA6100 AGK07018.1 IS6100 transposase Not tested SGI1 Protein 4e-34 43
tnpA6100 AGF35032.1 IS6100 transposase Not tested SGI1 Protein 2e-33 43
tnpA CAJ77056.1 Transposase Not tested AbaR1 Protein 2e-33 43
tnp YP_252034.1 transposase for IS431mec Not tested SCCmec Protein 2e-27 41
unnamed BAB47648.1 putative transposase of IS431 Not tested Type-III SCCmec Protein 2e-27 41
SAPIG0054 YP_005732864.1 transposase Not tested Type-V SCCmec Protein 3e-27 41
tnp BAD24823.1 transposase for IS431 Not tested Type-V SCCmec Protein 7e-28 41
SE0090 NP_763645.1 transposase for IS-like element Not tested SCCpbp4 Protein 3e-27 41
tnp YP_252008.1 transposase for IS431mec Not tested SCCmec Protein 1e-27 41
unnamed BAB47638.1 putative transposase of IS431 Not tested Type-III SCCmec Protein 2e-27 41
unnamed BAD24828.1 transposase for IS431 Not tested Type-V SCCmec Protein 1e-27 41