Gene Information

Name : orfB (Avi_7504)
Accession : YP_002539829.1
Strain :
Genome accession: NC_011981
Putative virulence/resistance : Unknown
Product : IS3 family transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 454438 - 455295 bp
Length : 858 bp
Strand : -
Note : -

DNA sequence :
ATGAAACGGGACATCCTCATGACAAACGCGGCTCAACCATCCGTAAAATCCACCCCCTACTGGTGGGATGGCTGCACGTT
TCCAACCTTGTCGACCAAGCCGGTGAGCGCCACCTGTGACGTCGCTATTGTTGGCGGTGGCTACACCGGTCTCTCAGCCG
CCATCGAGCTTGCGCGGGCCGGCCTGCATGTTCAGCTGTTTGATCGGACATCGCTTGGGCAAGCCGCATCCAGCCGCAAC
GGCTGGGTGGTGAATCCGAAGAGAAACTATCGTCTTTACAAGGAGATGGACCTGCAACTGCGCAACAAGGTGCCAAAACG
GCGCGTCAAAGCAAAGCTGCGATCGGACCGCACCGCAGCCACCCGTTCGAACGACGTCTGGGCCATGGATTTCGTGCATG
ACCAACTGGCCACAGGTCGCAAGATCAGGGTTCTCACGGTTGTCGATACCTTCTCGCGCTTCTCTCCGGCGGTAGATGCC
CGCTTCAGCTATAAAGGGGAAGACGTCGTGCAGACCCTCGAACGCGTATGCCGGCAGGTCGGTTACCCGGCCACCATTCG
GGTGGACAACGGCAGCGAATTCATCTCTCGTGACCTCGATCTCTGGGCCTATCATAGAGGCGTCGTGCTTGACTTCTCGC
GGCCGGGCAAGCCGACGGACAACAGCTACATCGAGAGTTTTAATGGCAAGTTCCGGGCAGAGTGCCTGAACGCCCACTGG
TTTATGAGCCTTGACGACGCAAGGGCAAAGATGGAGGATTGGCGTAGAGACTATAACGAGTTCCGGCCACACAGCGCGAT
CGGCAACAAGGTGCCGATTTCGCTTATGAACGGCTCATCGGCACCCACGCCAACCTGA

Protein sequence :
MKRDILMTNAAQPSVKSTPYWWDGCTFPTLSTKPVSATCDVAIVGGGYTGLSAAIELARAGLHVQLFDRTSLGQAASSRN
GWVVNPKRNYRLYKEMDLQLRNKVPKRRVKAKLRSDRTAATRSNDVWAMDFVHDQLATGRKIRVLTVVDTFSRFSPAVDA
RFSYKGEDVVQTLERVCRQVGYPATIRVDNGSEFISRDLDLWAYHRGVVLDFSRPGKPTDNSYIESFNGKFRAECLNAHW
FMSLDDARAKMEDWRRDYNEFRPHSAIGNKVPISLMNGSSAPTPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-42 48