Gene Information

Name : afuC (Avi_7453)
Accession : YP_002539801.1
Strain :
Genome accession: NC_011981
Putative virulence/resistance : Resistance
Product : ABC transporter nucleotide binding/ATPase protein (iron)
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 419448 - 420491 bp
Length : 1044 bp
Strand : +
Note : -

DNA sequence : 
ATGTCCACACTCGCCCTCGAAAACGTCTCGAAAAACTATTCCATCGTCACCGCGATTGAGCCTTTGTCGCTCACGATTGA
TGATGGTGAACTGGTCTGCCTGCTCGGCCCATCCGGGTCGGGAAAATCAACATTGCTGCGCATTATTGGCGGGTTCGAGA
CGCCGTCGGGCGGCAAGGTGCTGATTGATGGCGTGGATGTTGCACGGACGCCGCCGGAAAAACGCCCTACCGCCATGGTC
TTCCAAAGCCATGCCCTGTGGCAGCACATGACCGTGTTTGAAAACATTGCCTTTGGCCTGACGCTGCGCGGCCTGCCGAA
AGCCGAGATTGCCCGCAAGGCCTCCGATGCCTTGGCCATGGTGGGGTTGGCGGATTATGGCAAGCGCCTCCCGGCGCATC
TGTCCGGCGGCCAGCGTCAGCGTGTTGCCATTGCTCGCTGCGTCGTGCTGGAGCCCAAAATTCTGCTGATGGATGAGCCT
TTTGCCAGCCTCGATCAACACCTGCGCGACCGTTTGCGCGAAGAGGTGCGGCAAATCCAGAAAAAACTCGGCATTACCAC
CGTGTTCGTCACCCATGGTCAGGATGAAGCGCTCTCTGTTGCTGACCGGATTGTGGTGATGAGCATGGGGCGAATTGAAC
AGGTGGGCACGCCGCGCGAAATTTACTCAACGCCCAATTCGCCTTTTGTTGCCAGCTTCATTGGCGATATGAATTCCCAT
AGCATTCAGATCAACCAAGGTGGCGCGCATCTGGGTGGCGTTGCTATTGATGCGCCCATTGAGGCGGGCGAGGCACTGTT
AACTGTGCGCCCGGAAGATATTGTCCTGTCGCCATCCGATGATCAGCAAGGGGCGTGTGTGCGGCGTATTGTCAATTACG
GCTCTTTCCTCAAGATCGAGGCGCAAGCGCAGGATGGCACCGTCTGGAAAGTTCAAACACCGAAAGACGCCGACATCAAG
GAAGGGGTGTTCTATACCCCGGTTGTCGCCCGCTACACGGTGTTTCGCGATAACAAGGCCGTGCATCATGCCGGGCCTGC
ATAA

Protein sequence : 
MSTLALENVSKNYSIVTAIEPLSLTIDDGELVCLLGPSGSGKSTLLRIIGGFETPSGGKVLIDGVDVARTPPEKRPTAMV
FQSHALWQHMTVFENIAFGLTLRGLPKAEIARKASDALAMVGLADYGKRLPAHLSGGQRQRVAIARCVVLEPKILLMDEP
FASLDQHLRDRLREEVRQIQKKLGITTVFVTHGQDEALSVADRIVVMSMGRIEQVGTPREIYSTPNSPFVASFIGDMNSH
SIQINQGGAHLGGVAIDAPIEAGEALLTVRPEDIVLSPSDDQQGACVRRIVNYGSFLKIEAQAQDGTVWKVQTPKDADIK
EGVFYTPVVARYTVFRDNKAVHHAGPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 7e-39 44
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-39 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
afuC YP_002539801.1 ABC transporter nucleotide binding/ATPase protein (iron) BAC0604 Protein 1e-46 45