Gene Information

Name : Avi_7172 (Avi_7172)
Accession : YP_002539582.1
Strain :
Genome accession: NC_011981
Putative virulence/resistance : Unknown
Product : ABC transporter nucleotide binding/ATPase protein (oligopeptide)
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 138936 - 140579 bp
Length : 1644 bp
Strand : -
Note : -

DNA sequence :
ATGAGTAAGACCCCTTCTGTTCTCGATATCAGAGAACTGAATATTTCCTATGGAGATGGAGAGAGCCGCACCCGCGTGGT
GCATGATGTGTCGCTCGAAGTCGGTGCTGGCGAGGTTGTGGCACTGGTGGGCGAAAGCGGTTCTGGCAAAACCTCCACGG
CACAGGCCATCATTGGCCTCCTCTCTGGCAATGGGCAGATTGATAGCGGCTCTATTCGCCTGAATGGCGAGGAGATTTCC
CGCTGGAGTGAAAAGAGCTTGCGCGGCATTCGCGGCCCCGTTCTCAGCCTGATCCCGCAAGACCCGTCGAATTCGCTCAA
TCCGGTACTCACGGTTGGCGCGCAGGTGCGCGAAATTCTGGAAATCCACGGCAAGCTTTCCCGCCGGGATGCAGATCGGC
GGGTGGTGGAGCTGTTGACACAGGTGGGCCTCTCGCAGCCAGCGCTTCGCGCCAGACAATATCCACACGAACTCTCTGGC
GGCATGAAACAGCGGGTGCTGATTGCCATCGCCATTGCGCTGAAACCAGCACTGATCATTGCCGATGAGCCAACCTCGGC
GTTGGATGTGACCGTGCAGCGTCGCATCCTGGATTTGATTGACGATCTGCGCAAAGCTTACGGCACCGCCGTGCTGCTGG
TGACCCATGATCTGGGTGTTGCCGCCGACCGCTCGGATCGGTTGGTGGTCCTTCAGTCCGGCCGTATTCAGGAGCAAGGC
AAAACCGCAGAGGTGCTGGTCGCGCCCAAAAGCGCCTATACGGCAAGGCTTTTATCCGATGCGCCCTCGTTGGCGGCCCC
GGTTGTGCGGCCTGCCATTGCGGCGGATCGGCCCATCAGTGTTACCGTCGATAATCTCGTGCAGGAGTTTAAACTGCCAA
CGGGTGAGCGTTTCCGCGCCGTGGATGGTCTTTCCTTCACCGTTCCCCAAGGCACCACCCACGCCATTGTTGGCGAATCC
GGCTCTGGCAAAACCACCACAATCCGCAGCATTGCCGGATTTCAGAAAGCCACATCTGGCAGCATCCGCGTGGGTGATTT
TGACCTTGGCAGCCTGAACCACAAAAGCCTGCGCGCGTTCCGGCGCAAGGTGCAGCTTGTCTATCAAAACCCGTGGAGTT
CTCTGGACCCCAAGCAGACGATTTTCTCGATTGTCGAAGAACCGCTGCTGAATTTTGAACCGCTTCCCAAGCAAGAGCGC
GCCGCCCGCGTGGAAGCCATGATTGAGCGTGTTGGCCTGCCGCTCTCGGTTCTCAACCGTAAACCCCATGCGCTGTCAGG
CGGACAGCGCCAGCGAGTGGCCGTTGCCCGCGCTCTGGTGCTGGAGCCTGAGGTGGTTGTGCTGGATGAGGCCGTCTCGG
CGCTGGATGTGACGGTACAGGCGCAAATCCTTGCCCTGCTTGGCAGTTTGCAGCGCGATTTTGGCCTGACCTATATTTTC
GTCTCGCACGATCTGGCCGTCGTGCGCCAGATCGCCGACACGGTCTCGGTTTTGCACAATGGCAAACAGGTTGATTACGG
CCCGGTTGAGACGGTCTTCACCCACCCGCAAAGCGCCTACACCCGCGAGTTGATCGAGGCCATTCCGGGCCGGGCTTTTC
CGAAGAGACATCAACATTCACTGACAGCAGGATCACCATCATGA

Protein sequence :
MSKTPSVLDIRELNISYGDGESRTRVVHDVSLEVGAGEVVALVGESGSGKTSTAQAIIGLLSGNGQIDSGSIRLNGEEIS
RWSEKSLRGIRGPVLSLIPQDPSNSLNPVLTVGAQVREILEIHGKLSRRDADRRVVELLTQVGLSQPALRARQYPHELSG
GMKQRVLIAIAIALKPALIIADEPTSALDVTVQRRILDLIDDLRKAYGTAVLLVTHDLGVAADRSDRLVVLQSGRIQEQG
KTAEVLVAPKSAYTARLLSDAPSLAAPVVRPAIAADRPISVTVDNLVQEFKLPTGERFRAVDGLSFTVPQGTTHAIVGES
GSGKTTTIRSIAGFQKATSGSIRVGDFDLGSLNHKSLRAFRRKVQLVYQNPWSSLDPKQTIFSIVEEPLLNFEPLPKQER
AARVEAMIERVGLPLSVLNRKPHALSGGQRQRVAVARALVLEPEVVVLDEAVSALDVTVQAQILALLGSLQRDFGLTYIF
VSHDLAVVRQIADTVSVLHNGKQVDYGPVETVFTHPQSAYTRELIEAIPGRAFPKRHQHSLTAGSPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-94 47
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-63 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-63 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-63 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-63 43