Gene Information

Name : Geob_0570 (Geob_0570)
Accession : YP_002536038.1
Strain : Geobacter daltonii FRC-32
Genome accession: NC_011979
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 643629 - 644303 bp
Length : 675 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_0894 ABC transporter

DNA sequence : 
ATGAATGAGACGATTATTACCGCTGAAAAAGCGACAAAAAGCTACGTTACCGGCAGCGTCACCACCCATGCCTTGCGCGG
GGTCGATCTCAGCATCGAGAAAGGTTCCTTTACCTGCATCATCGGCCCTTCCGGCCACGGCAAAAGTACTCTCATGCACC
TGATCGGCGGTCTGGACCGCCCGAACAGCGGTACTATCACCGTGGCCGGCAGAGAGCTGAGCAGGCTCGACAACAGCAGC
CTGGCCAGGCTGAGGGGTGAGAAGATCGGCTTCGTTTTCCAGTTTTTCAACCTGCTGCCGGGACTGACGGCCCGGGAAAA
CGTGGAAACGGCCATGATGCTCTCCGGGGTCCCGGAAAAAGAACAGGCCCCCCGTGCACTTGACATGTTGTCGCAGGTCG
GTCTTGCAGACAAGGCCGATGCCAGGCCGAATCAGCTCTCCGGCGGCCAGCAGCAGAGGGTGGCCATCGCCCGGGCTCTG
GCTAATAATCCGGAGATCCTTTTGATGGACGAGCCGACCGGCAATCTGGACTCGGCAGCTGAGGCCGAGGTGCTGGAGAT
ACTGTTCAAGCTTCACCGACAGGGGAAGACCATCATCATCGTCACCCACAACAGCGACATTGCCGCCAGAGCCCAGCATA
TCATCAGGGTAAAGGATGGTCGGATAGCTCCATAA

Protein sequence : 
MNETIITAEKATKSYVTGSVTTHALRGVDLSIEKGSFTCIIGPSGHGKSTLMHLIGGLDRPNSGTITVAGRELSRLDNSS
LARLRGEKIGFVFQFFNLLPGLTARENVETAMMLSGVPEKEQAPRALDMLSQVGLADKADARPNQLSGGQQQRVAIARAL
ANNPEILLMDEPTGNLDSAAEAEVLEILFKLHRQGKTIIIVTHNSDIAARAQHIIRVKDGRIAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-29 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geob_0570 YP_002536038.1 ABC transporter NC_008702.1.4606598. Protein 3e-39 47
Geob_0570 YP_002536038.1 ABC transporter NC_012469.1.7686878. Protein 1e-43 45
Geob_0570 YP_002536038.1 ABC transporter NC_012469.1.7685735. Protein 2e-36 45
Geob_0570 YP_002536038.1 ABC transporter CP001581.1.gene598.p Protein 3e-40 44