Gene Information

Name : Geob_3819 (Geob_3819)
Accession : YP_002539257.1
Strain : Geobacter daltonii FRC-32
Genome accession: NC_011979
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 4282019 - 4283461 bp
Length : 1443 bp
Strand : +
Note : KEGG: gur:Gura_4409 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta

DNA sequence : 
TTGAAAACAACTTTCCGCAAGACCAAGATAATTGCCACTCTGGGGCCAAGCAGTTCTTCTGAAAAGATGATAACCCGCCT
CATGGATGCTGGTGTCGATGTTTTCCGTCTCAACTTTTCCCATGGCTCCCAGCAAGAAAAAAGAGCTCTCATCACCACCA
TCCGGGCTCTTTCGGACAGGAAAAAGGTGGCAATCGCCATTCTTGCCGATCTCCAGGGGCCGAAGATCAGGACCGGCCGC
ATGGCCGATGGGGCCATTCGCCTGGTGAAGGGTGAAAAACTGGATATTACCACCGATGAAGTGCTCGGCCGTCCCGGACT
GATATCCACCATCTACAAGGCCTTACCCCATGATGTGAAACCGGGATCGAAAATACTGCTTGATGACGGCATGATTGAAC
TGAAGGTTGTTTCAATCTCCGGTAACGTCGTTCACTGTAATATTGTCGAAGGAGGGATGCTGAAAGATCTCAAGGGTATC
AACCTTCCCGGGGTGGCAGTTTCTGCGCCTTCACTTTCCGATAAGGACCGGGCGGACCTGGAATTCTGCCTTGAGATGGG
GGTCGATTTTGTCGCCCTTTCCTTTGTCCGCCAGGCCTCGGATGTGGAGGGTATCAAGGAGATAATCCGTGGCAAGGGGC
TCAATACGCCGGTGGTTGCCAAGATAGAAAAGCCTGAAGCCCTGCGCAACTTCAACAGCATCCTTGCCGTGACGGATGCT
GTAATGGTTGCACGGGGGGACCTTGGTGTCGAACTGAGTGCAGAGCGGGTTCCCCTGGTGCAGAAAAGCATAATCCGCGC
CTGTAATGAGGTGGGCAAGCCGGTAATTACAGCAACCCAGATGCTGGAATCAATGATTGTGCATGCCCGCCCCACCCGCG
CTGAAACATCCGATGTGGCCAATGCCATTCTTGACGGGACCGATGCCGTCATGCTTTCCGGAGAGACTGCTTCCGGTGCT
TATCCCATCGAGGCGGTGCGGACCATGGCCAAAATCGCGCTGGATATCGAACACGCTGAACTATGGCGTATTCCGGCCAT
AAAACAGGTACATAGCGATAACGTTCCCGAGGCCGTCGCCGAAGCCTCCTGTCACGCCGCATCGACACTGAAGGCCAAGG
CTTTGGTTGTTTTCACCCAATCTGGAAACACTGCCGCCCTCATCTCAAAGTTCCGTCCGCAACTGCCCATTATCGCCTTT
ACACCATTTCCGGAAATCCAGCGCCGGCTTGCCCTCTATTGGGGGGTTAAAAGCTACCCTGTGGGCTCTGTGGGAGGCAC
CAGGCAGCAGATAAAGGTCGGCGAGGAAACACTGATGACCACAGGCTTCAGGAAAGGTGACCTGGTCGTTGTCTCCATGG
GAGTGCCTTTAGAAGCAAAAGGCTCTACCAATCTGATGAAGGTCCACAGGTTGGGCACTGAAGGCTACTATGAGATTTTT
TGA

Protein sequence : 
MKTTFRKTKIIATLGPSSSSEKMITRLMDAGVDVFRLNFSHGSQQEKRALITTIRALSDRKKVAIAILADLQGPKIRTGR
MADGAIRLVKGEKLDITTDEVLGRPGLISTIYKALPHDVKPGSKILLDDGMIELKVVSISGNVVHCNIVEGGMLKDLKGI
NLPGVAVSAPSLSDKDRADLEFCLEMGVDFVALSFVRQASDVEGIKEIIRGKGLNTPVVAKIEKPEALRNFNSILAVTDA
VMVARGDLGVELSAERVPLVQKSIIRACNEVGKPVITATQMLESMIVHARPTRAETSDVANAILDGTDAVMLSGETASGA
YPIEAVRTMAKIALDIEHAELWRIPAIKQVHSDNVPEAVAEASCHAASTLKAKALVVFTQSGNTAALISKFRPQLPIIAF
TPFPEIQRRLALYWGVKSYPVGSVGGTRQQIKVGEETLMTTGFRKGDLVVVSMGVPLEAKGSTNLMKVHRLGTEGYYEIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-79 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 8e-79 43
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 8e-79 43
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-78 43
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 3e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geob_3819 YP_002539257.1 pyruvate kinase VFG0479 Protein 3e-79 43