Gene Information

Name : Geob_2993 (Geob_2993)
Accession : YP_002538437.1
Strain : Geobacter daltonii FRC-32
Genome accession: NC_011979
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 3270760 - 3272172 bp
Length : 1413 bp
Strand : -
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: gur:Gura_2228 glutamine synthetase, type I

DNA sequence : 
ATGACACCAAAACAAGTGGTTGAGTTTGCCAAAGAAAATGGCGCACTAATGGTCGATTTTAAGTTCATGGACTTCGTGGG
AATCTGGCAGCACATTTCGATTCCCATCACCGAGTTCAGTGAAGATACCTTTGAAGAAGGTCAGGGATTTGATGGTTCCT
CCATCCGCGGCTGGCAACCGATCCATGCTTCCGACATGATCCTGCTCCCTGATCCTTCCACCGCCAAAATGGACCCCTTT
GTCGCGATTCCGACTCTTTCGCTCATCTGCAACGTCTTCGATCCTATCACCAAGGAAGACTACACCCGTGATCCTCGTAA
CATCGCACGGAAGGCTGAAGCGTATCTGAAGTCCACCGCCATCGGCGATACTGCCTTTTTCGGACCTGAAGCTGAATTCT
TCATCTTTGACGATGTGCGCTATGATTCAAGCTCTAACCAGTCCTTCTATGTTGTTGACTCCGTCGAAGGCGCCTGGAAT
ACTGGCCGTGAAGAGTTTCCAAATCTCGGCTACAAGCCCGGCTTCAAGGGTGGCTACTTCCCGGTTTCTCCTAACGATTC
CCAGAACGACCTCCGTAATGAAATGGTCATAGAACTGCAGAAGGTCGGCATCAGGGTTGAGTGCCAGCACCACGAGGTTG
CCACTGGTGGCCAGGCCGAAATTGATATGCGTTTCTCTTCGCTGGTGGACATGGCCGATCAGCTCCAGTGGTTCAAATAC
GTCATCAAGAACGTAGCCAACAGAAATGGCAAAACTGTAACCTTCATGCCGAAGCCGCTCTATGGCGACAATGGTTCCGG
GATGCACTGCCACCAATCAATCTGGAAAGACGGCCAAAACCTGTTTGCCGGCGACGGCTATGGTGGGCTCTCCAAAATGG
CCCTTTACTACATCGGCGGCATCATCAAGCATGCGAAAGCCCTCTGCGCCTTCACCAACCCGACCACCAACTCCTACAAG
CGCCTGGTCCCCGGTTATGAAGCCCCTGTTAATATGGCATACTCCAGCCGTAACCGTTCCGCTTCCATCAGGATTCCGAT
GCTGTCTTCCAATCCGAAAGCAAAGCGTATCGAATATCGGACACCGGACCCCTCCTGCAATGGCTACCTTGCCTTCGCCG
CCATGCTCATGGCCGGTCTCGACGGTATCGAAAACAAGATCGATCCGGGCCAGCCGCTGGACAAGGACATCTACGGACTT
TCTCCGGAAGAACTTGCTGATATACCTTCAGCTCCGGGCAGCCTGGAAGAAGCTCTCAATGCACTCAAGGAAGATCACGA
GTTCCTCCTCAAAGGTGACGTCTTCACACCTGACGTTATCGAGAAATGGATCGAGTACAAGACTGAGGCAGAGGTTACCC
CTGTCCGCATGCGTCCTGTTCCCCTTGAATTCGCTCTTTACTTCGACATTTAA

Protein sequence : 
MTPKQVVEFAKENGALMVDFKFMDFVGIWQHISIPITEFSEDTFEEGQGFDGSSIRGWQPIHASDMILLPDPSTAKMDPF
VAIPTLSLICNVFDPITKEDYTRDPRNIARKAEAYLKSTAIGDTAFFGPEAEFFIFDDVRYDSSSNQSFYVVDSVEGAWN
TGREEFPNLGYKPGFKGGYFPVSPNDSQNDLRNEMVIELQKVGIRVECQHHEVATGGQAEIDMRFSSLVDMADQLQWFKY
VIKNVANRNGKTVTFMPKPLYGDNGSGMHCHQSIWKDGQNLFAGDGYGGLSKMALYYIGGIIKHAKALCAFTNPTTNSYK
RLVPGYEAPVNMAYSSRNRSASIRIPMLSSNPKAKRIEYRTPDPSCNGYLAFAAMLMAGLDGIENKIDPGQPLDKDIYGL
SPEELADIPSAPGSLEEALNALKEDHEFLLKGDVFTPDVIEKWIEYKTEAEVTPVRMRPVPLEFALYFDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-101 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geob_2993 YP_002538437.1 glutamine synthetase, type I VFG1399 Protein 4e-132 60