Gene Information

Name : Geob_2989 (Geob_2989)
Accession : YP_002538433.1
Strain : Geobacter daltonii FRC-32
Genome accession: NC_011979
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3265988 - 3266686 bp
Length : 699 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gur:Gura_1222 two component transcriptional regulator

DNA sequence : 
ATGACGAACCAGAAAAACGGCTTGCCGCGAATACTTATTGTTGACGATGAACCTGCAATCCAGCGATTTCTTCAGACCGC
GCTCGATACGGGTGAATTCAGCCTCCACAAAGCTGACGACGGCCACTCGGCACTGGCTGCGGCAGTGGCGACGCGGCCTG
ACATTATCCTTCTCGACCTGGGGCTTCCGGATATGGACGGGGTCGAGGTGATCCGGCGGGTGAGGGAATGGTCTCAGGTA
CCTATTATCGTATTGTCGGTGCGGGAGCGGGAAGATGACAAGGTAAAGGCGCTGGATGCAGGGGCGGATGATTATGTGAC
CAAACCCTTCGGTATCCCTGAACTCCTGGCACGCATGCGTGTAGCTCTGCGGCGTTCTTTGCAGGAGGTGGTGGAACCGG
TATTCAGGAGCGGCGGCCTGGAAGTGGATTTACATCTACGGAAGGTGAAGGTGCAGGAAGAGGATGTACAGGTAACTCCG
ACGGAATATGATCTCCTGCGTCTGCTGGTCACACACGCGGGCAGAGTTCTTACCCATGCCCACCTCCTGAAACAGATCTG
GGGCGTAGGTTATGTGGAACAGCCGCATGTCCTGCGCGTAAACATAAGCAATCTGAGGCATAAGATAGAGAAGGACCCCT
CACGCCCACGGTATATCATCACAGAACCGGGTGTCGGCTACCGGTTGAAGATTCAATGA

Protein sequence : 
MTNQKNGLPRILIVDDEPAIQRFLQTALDTGEFSLHKADDGHSALAAAVATRPDIILLDLGLPDMDGVEVIRRVREWSQV
PIIVLSVREREDDKVKALDAGADDYVTKPFGIPELLARMRVALRRSLQEVVEPVFRSGGLEVDLHLRKVKVQEEDVQVTP
TEYDLLRLLVTHAGRVLTHAHLLKQIWGVGYVEQPHVLRVNISNLRHKIEKDPSRPRYIITEPGVGYRLKIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 8e-28 43
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 8e-28 43
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 1e-27 43
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 1e-27 43
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 1e-27 43
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 1e-27 43
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 3e-36 43
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 2e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geob_2989 YP_002538433.1 two component transcriptional regulator, winged helix family NC_012469.1.7685629. Protein 7e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geob_2989 YP_002538433.1 two component transcriptional regulator, winged helix family VFG1389 Protein 1e-27 41