Name : Geob_2607 (Geob_2607) Accession : YP_002538058.1 Strain : Geobacter daltonii FRC-32 Genome accession: NC_011979 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 2866946 - 2869258 bp Length : 2313 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGCCCATTGTCAAACTCACGGACGCGAAAACATTGCCTCTCCCCGATGCTGTGCTTGAGGCCCTTGGCCTGATGGCAGG GGATTCTGTCTCCTTGGAGATCGGAGAAGACGGGGCGCTGATGGTGCGGCGGGTGGTTGTCACTGAGCCCGTTATCCGGG AGGCAACCACGACTTTGCAGCAGTCAATTCATCGCAAGAACCTGCAAACGCCCATGCAGTTTATCAAGGGAGTTGGTCCT AAACTGGCGGAACAGCTGGCAAAGAAGGGGATTTCTGTCGTTGAAGATGCCCTGTTTTTGCTCCCTCACCGTTACGAGGA CCGACGGAGCTTAAGTAAGGTAAGCAAGCTGCGTCCCGGCGCCCATGAGGTTTTTTACGCAGAAGTGCTCTCTTTTGAAG CCAAGTCCACCAAGGGAGGGAAACGTTTTCTTGAGGTAACTGCCGGAGATGAAAGCGGCTCGATCACTCTCAAGTGGTTT CGCTTCAATCCTGTCTTTATGAAGAAGACCTGGCGCGTGGGGAGAAAAGGGGTATTTACCGGCGAGGTGGTCCAATACGG TTTCCAGAAGGAGATCCATCATCCTGAGGTGGAGTGGCTGGATGAAGGGGCCGATCTGGCGGCGCTCACAGCAAGGGATC CTCTCAATTTCGGCCGTATTCTGCCGGTTTATCCGCTGACGGAAGGACTCCACCAGAAGACACTGCGCAAGGTGATGAAG GAGGTCATCGACCGGTTCGTAATTGACGTGGAAAACCACCTGCCCCTGGGGGTAATGGAGAGGCACCACCTGATGCCCCT GGACGAGGCCCTGCGAGAGACTCATTTTCCGGGACACGATGCTGACCTGGCGAGACTGAACAACGGCGCAACCGTTGCCC ACAAGACCTTTTCATTTGACGAACTCTTTTTTCTCGAACTGGGGCTGGCCCTGAAGCGGAGCGGCATCGTCCTTGAACAG GGGATTGCTTTCCAGGTGACGCACAAATACACCAGGGAACTGCTGAAACTGCTTCCTTTCCATCTCACCGACGCCCAGCG CCGTGTCCTTTCCGAGATAAAGAACGACATGATGCTCCCCCATCCCATGCACCGGCTGGTACAGGGGGATGTGGGCTGCG GCAAGACCCTGGTGGCCCTTATGGCTGCACTGGTGGCGGTGGAAAACGACTACCAGGTGGCGATCATGGCGCCGACGGAG ATCCTTGCCGAGCAGCATTTCCTTACCATCCACCGCTGGTGCGACGCCTTGGGCATCAAGGTATCCCTGTTGACTTCAGG CATGAAGGGGAAGGCTAAAAGTGCCGTTCTCGAAGAAATCGCCGCCGGCAGGACCAGCATCGTCATCGGCACCCATGCGG TCATCCAGGAAAAGGTGGAATTCAACAGGCTCGGCCTGGGAATCATTGACGAGCAACACCGCTTCGGCGTACTGCAGCGG GGCATACTCAAAAGGAAAGGGATCAATCCTGACATCCTGGTGATGACCGCCACCCCCATTCCACGGACCCTGGCCATGAC GGTTTTCGGCGACCTTTCCCTGTCGGTCATCGACGAACTGCCTCCCGGCAGGACGCCGGTGGAGACTCGCGTCGCCTTCG AATCCAGGCGCTCCCAAGTGTACGGCATCATCCGCGAGGAGGTTAAGAAGGGACGGCAGGCCTACATCATCTATCCTCTG GTGGAAGAGACCGAAAAGTCGGAACTGAAGGCAGCGGCGCAGATGGCCGAACATCTGGCACGGGATGTTTTCCCGGAATT GCGGGTTGGGCTGCTCCACGGCAGGATGAAGCCGGAAGAGAAGGAATCGGTCATGGGTGCATTCAAGGCCAGGGAGACGG ACATTCTCGTTGCCACCACCGTCATTGAAGTGGGGATCGACGTGCCCAATGCCACGGTCATGGTCGTCGAGCATGCAGAG CGCTTCGGTCTTTCCCAGCTGCATCAACTGCGGGGCAGGGTAGGACGCGGCAGCGGCCAGTCCCGCTGTATTCTGCTCTC GTCCGGACAACTTTCCGAAGACGGCGAAAAACGCCTGCGGGTGATGGAATCCACCAATGACGGCTTCCGCATAGCCGAGG CCGATCTGGAGATCCGCGGCCCTGGAGATTTTCTCGGCACCCGTCAGGCAGGTCTTCCCGACTTCAGGGTGGCCAACATC CTGCGTGACGGACGTATCCTGGAAGCGGCTCGTGGAGAGGCCTTTGCCGTTGTTGAAAGAGATCCCGGTCTGGTTGACGG CGAAAATGCAGGTCTGCGCCAGGAACTTGTCAGACGCTGGGGTGGCCGCCTTGAACTAGCCGCCATTGCCTGA Protein sequence : MPIVKLTDAKTLPLPDAVLEALGLMAGDSVSLEIGEDGALMVRRVVVTEPVIREATTTLQQSIHRKNLQTPMQFIKGVGP KLAEQLAKKGISVVEDALFLLPHRYEDRRSLSKVSKLRPGAHEVFYAEVLSFEAKSTKGGKRFLEVTAGDESGSITLKWF RFNPVFMKKTWRVGRKGVFTGEVVQYGFQKEIHHPEVEWLDEGADLAALTARDPLNFGRILPVYPLTEGLHQKTLRKVMK EVIDRFVIDVENHLPLGVMERHHLMPLDEALRETHFPGHDADLARLNNGATVAHKTFSFDELFFLELGLALKRSGIVLEQ GIAFQVTHKYTRELLKLLPFHLTDAQRRVLSEIKNDMMLPHPMHRLVQGDVGCGKTLVALMAALVAVENDYQVAIMAPTE ILAEQHFLTIHRWCDALGIKVSLLTSGMKGKAKSAVLEEIAAGRTSIVIGTHAVIQEKVEFNRLGLGIIDEQHRFGVLQR GILKRKGINPDILVMTATPIPRTLAMTVFGDLSLSVIDELPPGRTPVETRVAFESRRSQVYGIIREEVKKGRQAYIIYPL VEETEKSELKAAAQMAEHLARDVFPELRVGLLHGRMKPEEKESVMGAFKARETDILVATTVIEVGIDVPNATVMVVEHAE RFGLSQLHQLRGRVGRGSGQSRCILLSSGQLSEDGEKRLRVMESTNDGFRIAEADLEIRGPGDFLGTRQAGLPDFRVANI LRDGRILEAARGEAFAVVERDPGLVDGENAGLRQELVRRWGGRLELAAIA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 4e-98 | 44 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Geob_2607 | YP_002538058.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 1e-115 | 46 |