Gene Information

Name : Geob_2607 (Geob_2607)
Accession : YP_002538058.1
Strain : Geobacter daltonii FRC-32
Genome accession: NC_011979
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 2866946 - 2869258 bp
Length : 2313 bp
Strand : +
Note : catalyzes branch migration in Holliday junction intermediates

DNA sequence :
ATGCCCATTGTCAAACTCACGGACGCGAAAACATTGCCTCTCCCCGATGCTGTGCTTGAGGCCCTTGGCCTGATGGCAGG
GGATTCTGTCTCCTTGGAGATCGGAGAAGACGGGGCGCTGATGGTGCGGCGGGTGGTTGTCACTGAGCCCGTTATCCGGG
AGGCAACCACGACTTTGCAGCAGTCAATTCATCGCAAGAACCTGCAAACGCCCATGCAGTTTATCAAGGGAGTTGGTCCT
AAACTGGCGGAACAGCTGGCAAAGAAGGGGATTTCTGTCGTTGAAGATGCCCTGTTTTTGCTCCCTCACCGTTACGAGGA
CCGACGGAGCTTAAGTAAGGTAAGCAAGCTGCGTCCCGGCGCCCATGAGGTTTTTTACGCAGAAGTGCTCTCTTTTGAAG
CCAAGTCCACCAAGGGAGGGAAACGTTTTCTTGAGGTAACTGCCGGAGATGAAAGCGGCTCGATCACTCTCAAGTGGTTT
CGCTTCAATCCTGTCTTTATGAAGAAGACCTGGCGCGTGGGGAGAAAAGGGGTATTTACCGGCGAGGTGGTCCAATACGG
TTTCCAGAAGGAGATCCATCATCCTGAGGTGGAGTGGCTGGATGAAGGGGCCGATCTGGCGGCGCTCACAGCAAGGGATC
CTCTCAATTTCGGCCGTATTCTGCCGGTTTATCCGCTGACGGAAGGACTCCACCAGAAGACACTGCGCAAGGTGATGAAG
GAGGTCATCGACCGGTTCGTAATTGACGTGGAAAACCACCTGCCCCTGGGGGTAATGGAGAGGCACCACCTGATGCCCCT
GGACGAGGCCCTGCGAGAGACTCATTTTCCGGGACACGATGCTGACCTGGCGAGACTGAACAACGGCGCAACCGTTGCCC
ACAAGACCTTTTCATTTGACGAACTCTTTTTTCTCGAACTGGGGCTGGCCCTGAAGCGGAGCGGCATCGTCCTTGAACAG
GGGATTGCTTTCCAGGTGACGCACAAATACACCAGGGAACTGCTGAAACTGCTTCCTTTCCATCTCACCGACGCCCAGCG
CCGTGTCCTTTCCGAGATAAAGAACGACATGATGCTCCCCCATCCCATGCACCGGCTGGTACAGGGGGATGTGGGCTGCG
GCAAGACCCTGGTGGCCCTTATGGCTGCACTGGTGGCGGTGGAAAACGACTACCAGGTGGCGATCATGGCGCCGACGGAG
ATCCTTGCCGAGCAGCATTTCCTTACCATCCACCGCTGGTGCGACGCCTTGGGCATCAAGGTATCCCTGTTGACTTCAGG
CATGAAGGGGAAGGCTAAAAGTGCCGTTCTCGAAGAAATCGCCGCCGGCAGGACCAGCATCGTCATCGGCACCCATGCGG
TCATCCAGGAAAAGGTGGAATTCAACAGGCTCGGCCTGGGAATCATTGACGAGCAACACCGCTTCGGCGTACTGCAGCGG
GGCATACTCAAAAGGAAAGGGATCAATCCTGACATCCTGGTGATGACCGCCACCCCCATTCCACGGACCCTGGCCATGAC
GGTTTTCGGCGACCTTTCCCTGTCGGTCATCGACGAACTGCCTCCCGGCAGGACGCCGGTGGAGACTCGCGTCGCCTTCG
AATCCAGGCGCTCCCAAGTGTACGGCATCATCCGCGAGGAGGTTAAGAAGGGACGGCAGGCCTACATCATCTATCCTCTG
GTGGAAGAGACCGAAAAGTCGGAACTGAAGGCAGCGGCGCAGATGGCCGAACATCTGGCACGGGATGTTTTCCCGGAATT
GCGGGTTGGGCTGCTCCACGGCAGGATGAAGCCGGAAGAGAAGGAATCGGTCATGGGTGCATTCAAGGCCAGGGAGACGG
ACATTCTCGTTGCCACCACCGTCATTGAAGTGGGGATCGACGTGCCCAATGCCACGGTCATGGTCGTCGAGCATGCAGAG
CGCTTCGGTCTTTCCCAGCTGCATCAACTGCGGGGCAGGGTAGGACGCGGCAGCGGCCAGTCCCGCTGTATTCTGCTCTC
GTCCGGACAACTTTCCGAAGACGGCGAAAAACGCCTGCGGGTGATGGAATCCACCAATGACGGCTTCCGCATAGCCGAGG
CCGATCTGGAGATCCGCGGCCCTGGAGATTTTCTCGGCACCCGTCAGGCAGGTCTTCCCGACTTCAGGGTGGCCAACATC
CTGCGTGACGGACGTATCCTGGAAGCGGCTCGTGGAGAGGCCTTTGCCGTTGTTGAAAGAGATCCCGGTCTGGTTGACGG
CGAAAATGCAGGTCTGCGCCAGGAACTTGTCAGACGCTGGGGTGGCCGCCTTGAACTAGCCGCCATTGCCTGA

Protein sequence :
MPIVKLTDAKTLPLPDAVLEALGLMAGDSVSLEIGEDGALMVRRVVVTEPVIREATTTLQQSIHRKNLQTPMQFIKGVGP
KLAEQLAKKGISVVEDALFLLPHRYEDRRSLSKVSKLRPGAHEVFYAEVLSFEAKSTKGGKRFLEVTAGDESGSITLKWF
RFNPVFMKKTWRVGRKGVFTGEVVQYGFQKEIHHPEVEWLDEGADLAALTARDPLNFGRILPVYPLTEGLHQKTLRKVMK
EVIDRFVIDVENHLPLGVMERHHLMPLDEALRETHFPGHDADLARLNNGATVAHKTFSFDELFFLELGLALKRSGIVLEQ
GIAFQVTHKYTRELLKLLPFHLTDAQRRVLSEIKNDMMLPHPMHRLVQGDVGCGKTLVALMAALVAVENDYQVAIMAPTE
ILAEQHFLTIHRWCDALGIKVSLLTSGMKGKAKSAVLEEIAAGRTSIVIGTHAVIQEKVEFNRLGLGIIDEQHRFGVLQR
GILKRKGINPDILVMTATPIPRTLAMTVFGDLSLSVIDELPPGRTPVETRVAFESRRSQVYGIIREEVKKGRQAYIIYPL
VEETEKSELKAAAQMAEHLARDVFPELRVGLLHGRMKPEEKESVMGAFKARETDILVATTVIEVGIDVPNATVMVVEHAE
RFGLSQLHQLRGRVGRGSGQSRCILLSSGQLSEDGEKRLRVMESTNDGFRIAEADLEIRGPGDFLGTRQAGLPDFRVANI
LRDGRILEAARGEAFAVVERDPGLVDGENAGLRQELVRRWGGRLELAAIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 4e-98 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geob_2607 YP_002538058.1 ATP-dependent DNA helicase RecG BAC0356 Protein 1e-115 46