Gene Information

Name : Geob_2355 (Geob_2355)
Accession : YP_002537810.1
Strain : Geobacter daltonii FRC-32
Genome accession: NC_011979
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2596394 - 2597098 bp
Length : 705 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_1457 ABC transporter

DNA sequence :
GTGAGGAGTGAGGCGGTAAAAGACATTTTACCGATGGTTGCGATTGATGGCTTGTCCAAGTCCTATCGGCGGGGGAGCCA
GATCATCCCCGTGCTGCAGGATGTATCCTTTACCATTGCCGAGGGAGAGTTCCTGGCCTTGATGGGGCCATCCGGTTCGG
GCAAGAGCACCCTCCTCAATCTGATCGCCGGCATTGACAAAGCCGACACCGGAACCATTCTGGTGGGGGGAACTGACATT
ACCAGTCTGTCAGAGGGTGAACTGGCGTCATGGCGAGCCGCCCATGTTGGCTTCATCTTTCAGTTCTACAACCTGATGCC
GGTACTTACCGCCCTTGAGAACGTGGAACTGCCATTGCTGCTTACCCATCTCACCAAGAAGGAACGTCGGGAACACGTGG
AAATGGTATTAAGTGTGGTCGGTCTGGCAGATCGCATGGATCATTACCCCTCGCAACTTTCCGGCGGACAGCAGCAGCGG
GTGGCCATTGCCCGGGCCATTGTCACCGATCCCGAAATCCTGGTGGCGGACGAACCAACCGGTGACCTTGATCGGGTGTC
TGCAGAAGACATCCTCAATCTCATGGATAATCTGGTCCGGAAATTCGGCAAAACCATCATCATGGTAACCCATGATCCCC
GGGCAGCTGAAAAGGCCCATCTGATCAAACATCTGGAAAAAGGATTCCTGTCGGGAGAAGAGTGA

Protein sequence :
MRSEAVKDILPMVAIDGLSKSYRRGSQIIPVLQDVSFTIAEGEFLALMGPSGSGKSTLLNLIAGIDKADTGTILVGGTDI
TSLSEGELASWRAAHVGFIFQFYNLMPVLTALENVELPLLLTHLTKKERREHVEMVLSVVGLADRMDHYPSQLSGGQQQR
VAIARAIVTDPEILVADEPTGDLDRVSAEDILNLMDNLVRKFGKTIIMVTHDPRAAEKAHLIKHLEKGFLSGEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-32 41
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geob_2355 YP_002537810.1 ABC transporter NC_012469.1.7686878. Protein 4e-44 47
Geob_2355 YP_002537810.1 ABC transporter NC_008702.1.4606598. Protein 3e-40 45
Geob_2355 YP_002537810.1 ABC transporter NC_012469.1.7685735. Protein 6e-37 43
Geob_2355 YP_002537810.1 ABC transporter CP001581.1.gene798.p Protein 5e-44 41