Gene Information

Name : Geob_2109 (Geob_2109)
Accession : YP_002537565.1
Strain : Geobacter daltonii FRC-32
Genome accession: NC_011979
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2341669 - 2342367 bp
Length : 699 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gme:Gmet_3037 ABC transporter-related protein

DNA sequence : 
ATGAACGATGTGGTCAAGGTCAGCAATGTGACCAAGATATACAGTGTCGGCGAACAGCGGGTAGAGGCGCTCAAGGGTGT
TTCCCTGACCGTCGTTCAGGGCGAATTCGTCGCTATCATGGGGGCTTCCGGCAGCGGAAAATCCACCTGCATGAATATCC
TCGGCTGCCTTGATGTCCCTACCTCCGGCGAATATCTGCTGGATGGAATAAGCATCGGCAAGCTCTCCGGAAACGATCTG
GCCGAGATCAGGAACAGGAAGCTGGGCTTTGTTTTCCAGGGATTCAACCTGTTATCGCGTACCACTGCCCGGGAAAATGT
TGAATTGCCGCTGGTTTATGCCAGGTGTCCGGCAGCAGCCAGAAAGGAAAGAGCCCTGGCGGCGCTTGACCAGGTAGGTT
TGGCGGAACGGTCGAACCATTTCAGCAACCAGATGTCCGGCGGACAGCAGCAGCGGGTTGCCATCGCCCGGGCACTGGTA
ACCGACCCGGCAATCATTCTGGCCGATGAACCGACCGGCAACCTGGACAGCAGGACCAGTGAAGAGATTATGGGGCTTTT
CCAGGAACTGAACCTGCAGGGTATAACCATCATCATGGTGACCCACGAGCCCGATATCGCCGCCCATGCAAAGAGGCAGC
TCACGTTCCGCGATGGGCAGATCATCGATGACCGGCCGAATCAACAGCTCAAGGTATAG

Protein sequence : 
MNDVVKVSNVTKIYSVGEQRVEALKGVSLTVVQGEFVAIMGASGSGKSTCMNILGCLDVPTSGEYLLDGISIGKLSGNDL
AEIRNRKLGFVFQGFNLLSRTTARENVELPLVYARCPAAARKERALAALDQVGLAERSNHFSNQMSGGQQQRVAIARALV
TDPAIILADEPTGNLDSRTSEEIMGLFQELNLQGITIIMVTHEPDIAAHAKRQLTFRDGQIIDDRPNQQLKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-32 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geob_2109 YP_002537565.1 ABC transporter NC_012469.1.7686878. Protein 5e-56 55
Geob_2109 YP_002537565.1 ABC transporter NC_008702.1.4606598. Protein 1e-43 47
Geob_2109 YP_002537565.1 ABC transporter CP001581.1.gene798.p Protein 2e-35 44
Geob_2109 YP_002537565.1 ABC transporter CP001581.1.gene598.p Protein 8e-35 42
Geob_2109 YP_002537565.1 ABC transporter NC_012469.1.7685735. Protein 9e-33 42