Gene Information

Name : Geob_2021 (Geob_2021)
Accession : YP_002537478.1
Strain : Geobacter daltonii FRC-32
Genome accession: NC_011979
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2262875 - 2263561 bp
Length : 687 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gur:Gura_1657 ABC transporter

DNA sequence : 
ATGTTGAGACTACGCGATGTAACCAAGACCTATGACGGAAAGTCGGAAGTGACGGCCCTTGCAGGGATCACCCTCACTAT
CGATCCGGGCGAAATGGTGGCGATCATGGGGCCGTCCGGCTCCGGCAAGTCAACCTTGCTCAACCTTTTCGGAGGGCTGG
ATGTTCCTACCTCGGGCCAGGTCATGGTGGCGGGGAAGGATCTGGCGGGGGAAAACGAGAAGGAACGGTCGCTGTTTCGC
CGCTCGAAAATTTCTTATATTTTCCAGGCCTATCACCTGATGCCGACCTTGAAGGTAAGCCAGAACGTGGCGCTGCCCCT
GCATCTGGCCGGCGTATCTTCCACCGAGATCAGTCGCAGGGTTGCCCAGGCCCTGAAGGACGTCGGCTTGGAGTCGCGGG
CGAATCACCTTCCCGACGAGCTTTCCGGCGGCGAGCGCCAGCGGGTCGCCATTGCCCGGGCGCTGGTGACCGGGGCGCCG
CTCCTTTTGGCGGACGAGCCCACCGGCAACCTGGACAGCGCCCGTGGAGAGGAGATCCTGAAGCTGCTCCGTACCATCCA
CCGTGAGCGGGGCACCACCATCGTCATGGTCACCCACGACCACCACGCCGCTTCCGCCTGCGACCGCCTGATAAGCCTGC
GGGACGGCAGGGTTGAGGGGGATGGCGCCGTTGGAGGTGGGAAATGA

Protein sequence : 
MLRLRDVTKTYDGKSEVTALAGITLTIDPGEMVAIMGPSGSGKSTLLNLFGGLDVPTSGQVMVAGKDLAGENEKERSLFR
RSKISYIFQAYHLMPTLKVSQNVALPLHLAGVSSTEISRRVAQALKDVGLESRANHLPDELSGGERQRVAIARALVTGAP
LLLADEPTGNLDSARGEEILKLLRTIHRERGTTIVMVTHDHHAASACDRLISLRDGRVEGDGAVGGGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-34 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-33 44
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-25 43
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-25 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geob_2021 YP_002537478.1 ABC transporter NC_008702.1.4606598. Protein 4e-41 52
Geob_2021 YP_002537478.1 ABC transporter NC_012469.1.7686878. Protein 4e-43 47
Geob_2021 YP_002537478.1 ABC transporter CP001581.1.gene598.p Protein 1e-42 46
Geob_2021 YP_002537478.1 ABC transporter CP001581.1.gene798.p Protein 6e-43 45
Geob_2021 YP_002537478.1 ABC transporter NC_012469.1.7686946. Protein 6e-32 42