Gene Information

Name : Geob_1950 (Geob_1950)
Accession : YP_002537408.1
Strain : Geobacter daltonii FRC-32
Genome accession: NC_011979
Putative virulence/resistance : Unknown
Product : dihydrolipoamide dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1249
EC number : -
Position : 2184587 - 2186002 bp
Length : 1416 bp
Strand : +
Note : TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: gur:Gura_1264 dihydrolipoamide dehydrogenase

DNA sequence :
ATGTCCGATGAAATGTACGATCTGATCATTATCGGTGCCGGGCCGGGGGGCTATGTGGCGGCGATCCGCGCTGCCCAATT
GGGGATGAAGGTGGCGGTGGTGGAGCGTGGCGAACGCCTGGGCGGGGTTTGCCTCAATGAGGGCTGCATTCCCAGCAAAG
CGCTGCTTGATTCCAGCGAGCTCTTTGCCCTGGCACGGGATAAATTTGCCCTCCATGGTATCGGCATCAACGCACCCACC
CTGGACTTGACGAAAATGATGGCCCGCAAGGACGACGTGGTGAAAAAACTCACCGACGGCATCGCCTTCCTTTTCAAGAA
GAACAAAATAATACGCATCCTGGGAACGGCCAAGCTTGGGGCGGCCGGCAATGGGGAGCGGCGGGCGGTGGAGGTCCTGG
GGGCAGGGGGAGAAAAGCAGGCGATAGTCGGCAAACACATACTTCTTGCCACCGGCAGTCAGGCCATAGAGGTGCCGGGG
CTCCCCTTCGACGGCGAGACGGTGGTGAGCGCCCGCGAAGCGCTATCTTTTCCGGAAGTGCCTGAGCACCTGCTGGTGAT
CGGCGGTGGTTATATCGGACTGGAGCTTGGTTCGGTCTGGCTGCGCCTGGGAAGCCGGGTGACAGTGGTGGAGATGTTGC
CGAACATTCTGCCCAACACCGACCGGCAGGTTGCCGACACCCTTTTGCGGTCCCTGAAAAAGCAGGGAATGGGATTCATG
CTGGGGGCCAAGGTTGAAGGTTTGCAGAAGAAGGATGGCAAGGCATCCGTCACCGTCAATGTCGCCGGCAAGGGTGAACA
GCTTTCCTGTGACAGGGTGCTGGTCGCTGTGGGGAGAAAATCGCTTACAGACGGGCTCGGGGGGGAAGAGGCCGGTATTG
CCTTCGACTGCGGCAGGATCAGAGTTGACGATAATTTTGCCACCTCTGTCCCCGGAATTTATGCCATCGGCGACCTTATT
CATGGCCCGCTCCTTGCCCACAAGGCGATGATGGAGGGTGAGGTCTTCGCCGAAAGGCTGGCAGGTCAAGCCTCGGTGGT
TGATTATGAGTTCATTCCCGGTATCATTTACACATGGCCTGAAGCGGCATCGGTTGGAAAAACCGAGGAACAGCTGCAGG
CGGAGAGCCTCTCTTATTCTGTCGGACGCTTCAATTTCATGGCCAATGGCCGGGCCAGGTGCATGGACGAGACGGAAGGA
TTCGTCAAGGTGCTTGCCCACAAGGATACGGGCCGGGTGCTCGGTGTCCATATCATTGGTCCCCGTGCCTCGGATATGAT
TGCCGAAGGGGTGACGGTGATGACCTACGGCGGCACCGCCGAGGATATAGCACTCACTTTCCATGCCCATCCGACGTTGT
CGGAGGCGGTTAAAGAAGCAGCGCTGGATGTGGAAAAACGAGCAATCCATGCGTGA

Protein sequence :
MSDEMYDLIIIGAGPGGYVAAIRAAQLGMKVAVVERGERLGGVCLNEGCIPSKALLDSSELFALARDKFALHGIGINAPT
LDLTKMMARKDDVVKKLTDGIAFLFKKNKIIRILGTAKLGAAGNGERRAVEVLGAGGEKQAIVGKHILLATGSQAIEVPG
LPFDGETVVSAREALSFPEVPEHLLVIGGGYIGLELGSVWLRLGSRVTVVEMLPNILPNTDRQVADTLLRSLKKQGMGFM
LGAKVEGLQKKDGKASVTVNVAGKGEQLSCDRVLVAVGRKSLTDGLGGEEAGIAFDCGRIRVDDNFATSVPGIYAIGDLI
HGPLLAHKAMMEGEVFAERLAGQASVVDYEFIPGIIYTWPEAASVGKTEEQLQAESLSYSVGRFNFMANGRARCMDETEG
FVKVLAHKDTGRVLGVHIIGPRASDMIAEGVTVMTYGGTAEDIALTFHAHPTLSEAVKEAALDVEKRAIHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0077 NP_763632.1 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 Not tested SCCpbp4 Protein 3e-76 43