Gene Information

Name : Geob_1413 (Geob_1413)
Accession : YP_002536874.1
Strain : Geobacter daltonii FRC-32
Genome accession: NC_011979
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 1559880 - 1561034 bp
Length : 1155 bp
Strand : +
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gur:Gura_3858 cystathionine gamma-synthase

DNA sequence :
ATGCACATTTCGACAGAGGCAGTACAGATTGGGCTGGATTGGGATTCAAGGACGGGGGCGGTTACCGTTCCCATTTATCA
GACTGCAACTTTCAGGCATCCCGGACTGGGGCAGAGTACCGGCTATGACTACAGCCGCTCGGGCAATCCGACCAGGCAGG
CATTGGAAGAGGGCATTGCCCGTCTCGATGGGGGGGCGAGGGGTTTTGCCTATGCCTCGGGGATGGCAGCGATAACTAAC
CTGCTCATGCTGTTTCAGCGTGGCGACCACCTGATCGTCACAGAGGACCTGTACGGCGGCACTTACCGACTCTTCGAGCA
GATCTTCCACCAGTACGGCCTGGAGTTCACCTATGTGGATACTTCCTCCCTGGACGAGGTGGCGGCAGCTCTTAAGCCCA
ATACCAAGGCACTCTTCGTTGAATCTCTGACCAATCCGCTGCTGAAGGTGGCGGACATTAGGGCTTTGAGCAACCTCTGC
CGGGAGCGGCAGCTGCTCTGCATCGTCGACAATACTTTTCTGACGCCATACCTGCTCCGGCCACTGGACCTTGGGGCGGA
CATCACCGTTTACAGCGCCTCCAAATACCTGGCAGGTCATAATGACACCATTGCCGGTCTCGTTGTGGCGAAAGATCCCC
AGCTCGCTGAGCGCATTTATTTCCTGCAGAACTCGGTCGGTGCCGTGCTGGGACCCCAGGATTCATGGCTGGTGATCCGC
GGCATGAAAACTCTGAGCGTCAGGATGGACCGGCAGCAGGAAAATGCAGCTGCCCTGGCATCCTGGCTGGAGGGACACCC
AACGGTGGCAAAAGTTCATTATCCGGGGCTTGCAGGACATGCAGGTCATGATCTATTGAAAGGCCAGGCTCGAGGATTCG
GCGCCATGATAGCCTTCGAGGTAACCGATCCGGCATTGGTGGAGACGCTGCTGCTCAAGACGCGTTTGATCTCCTTTGCG
GAAAGCCTTGGCGGGGTGGAGACCTTGATCACCTTCCCCGAGTTGCAGACCCATGCCGATATAAAGGCCGAGATAAGAGC
CAGGTTGGGCATCAATAATGTACTGTTGCGGCTGTCGGTGGGAATCGAAGATGTCAACGATCTCATTGCAGATCTGGAAC
AGGCCTTTGCACAGGAAGAAAAGGGGGAAGCATGA

Protein sequence :
MHISTEAVQIGLDWDSRTGAVTVPIYQTATFRHPGLGQSTGYDYSRSGNPTRQALEEGIARLDGGARGFAYASGMAAITN
LLMLFQRGDHLIVTEDLYGGTYRLFEQIFHQYGLEFTYVDTSSLDEVAAALKPNTKALFVESLTNPLLKVADIRALSNLC
RERQLLCIVDNTFLTPYLLRPLDLGADITVYSASKYLAGHNDTIAGLVVAKDPQLAERIYFLQNSVGAVLGPQDSWLVIR
GMKTLSVRMDRQQENAAALASWLEGHPTVAKVHYPGLAGHAGHDLLKGQARGFGAMIAFEVTDPALVETLLLKTRLISFA
ESLGGVETLITFPELQTHADIKAEIRARLGINNVLLRLSVGIEDVNDLIADLEQAFAQEEKGEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-88 47
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-89 47
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-68 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Geob_1413 YP_002536874.1 cystathionine gamma-synthase BAC0207 Protein 3e-60 42