|
Name : CTN_0488 (CTN_0488) Accession : YP_002534030.1 Strain : Thermotoga neapolitana DSM 4359 Genome accession: NC_011978 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATPase subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 482581 - 485043 bp Length : 2463 bp Strand : - Note : - DNA sequence : ATGTTTGATAAGTTCTCGGAAAAAACGGCTCAGATCTTTGTGACCGCCCAGGAAGAGGCAAAAGAACTCGGACATTCTTA CGTGGGAACAGAACACCTTCTGCTCGCAATCCTGAAGGTAGATAAAGGTCCTGCTGTAGAAGTCCTTGAAGAGATGGGCG CATCTTACTCGAAGGTAAGATCGGAGATCATCTCCATGGTTGGCATGGGGATGAGAGGTTTTGTCCCCTCACCTCAGATG ACCCCCAGAGCCAAGAGGGTAACTGAGCTCGCCTATGAAGAGGCAAAGATCCTTGGAAGTGACAAGATAAATCCCGAGCA CATTCTCCTTGGCATCCTCAGAGAAGGTGAAGGGATAGCGATCCACATACTGAGAAAACTGGGAGTGGATCTCAACGCTT TGAGAAGGGAGATCATAGACCTGTACTCCTACTCTTCGAATAAAGGTTTGGAATACGAAGAGGAAGAAGACTACACCTAC AGGTCCGTGAAACAACTCGAGGGATTCGGTGTCAACCTCACGGAACTTGCCGCAAAGAAAGAGTTAGACCCGGTCATAGG AAGAGAAGAGGAAATAGAGAGGGTCATGCAGGTTCTTGTGAGAAGGAAGAAGAACAATCCAGTTTTGATAGGAGATCCAG GAGTTGGTAAAACCGCCATCGTCGAAGGGCTCGCTCAGAGGATAGTGGCGGGTGACGTTCCGGAGATTTTGAGAAACAAG GTTATCTTCTCGCTGGACGTCGCCGCTCTGGTTGCCGGCACAAAGTACAGAGGAGAGTTTGAAAAGAGAATGAAGAAGTT GCTTCAGATAGTGACGAAAGACAAAAACATCATACTCTTCATAGACGAAATACACACGATCGTTGGAGCAGGTTCAGCGG AGGGTGCCATCGACGCTGCAAACATTCTGAAACCCGCTCTTGCTCGGGGAGAGATAAGCTGTATAGGTGCAACCACACCG GATGAGTACAGAAAGTACATAGAGAAAGATGCGGCCCTGGAAAGAAGGTTTCAGAAGATATATGTGAAGGAACCAACCGA AGAGGAAACACTCGAGATCTTGAAAGGTCTGAAGAAGAAATACGAATCACACCACAGGGTGATATACACGGACAAAGCAT TGGAGGCAGCAGTTTACCTGTCCAAAAGGTACATAACCGATCATTTCCTCCCGGATAAGGCGATCGATGTGATCGATGAA GCGGGAGCCCGGGCAAGGCTCAAGGTCTTCATCATTCCTCCTGAGTTGAAATCAATCAAAAACGAACTGGAAAAGATAAG AACCGACAAGGAACTTGCCGTTTTGAATCAGGATTACGAAAAGGCAGCAAAGTTGAAAGAGAAAGAAATGGAGCTTGAGA CAGAGTACAGAAGAAAATATGCCGAGTGGAGAAGAAAGGCGGAAACGGCCGTTGTGAAAGTGGATGTCGATGATATAGCA GAGGTTGTGTCCTCCTGGACAGGAGTGCCTCTCAAGAAGATCGAAGAAACGGAAGTGGAGAAACTCCTCAATCTCGAAGA AGCGCTCCACCAGAGGATCGTCGCCCAGGACGAGGCAATAAAGGCTGTTGCGAGGGCTATAAGGAGAGCAAGAAGTGGCT TGAAAGATCCAAGAAGACCGATTGGTGTCTTCCTCTTCCTTGGACCGACGGGAGTTGGAAAAACAGAACTTGCAAAGGCT CTCGCAGAGTATCTGTTTGGTGATGAAAGAGCGCTCATAAGATTCGACATGAGCGAGTACATGGAGAGATTCTCTGTCTC CAGGCTCATCGGAGCACCTCCTGGGTACGTGGGTTACGAAGAAGGAGGAACGCTCACAGAAAAAGTGAGAAGAAGGCCGT TCTCCGTCATCCTGTTCGACGAAATAGAAAAGGCTCATCCAGATGTTTTCAACTTGCTTCTTCAGATCATGGATGATGGA AGGCTCACCGACTCCCAGGGTCGCGAGGTCGATTTCAGAAACACCATAATCATCATGACAAGCAACATCGGAAGTTCCTA CATCAACAAGTCCAAGAGGACCCTTGGATTCGTCGGTGACGATGACGAAGAGAAAGAATTCGATAAAATAAAGGAACTCG TGCTCGATGAGGTGAAGAGGACATTCAGACCAGAGTTCCTGAACAGGATCGATGAGACCATCATCTTCCATCCACTCAGG AAGGAACACATAGAACAGATCATCGATATACTCCTGAGGGATCTCAGAAAGAGATTGGCAGAGAAGAACATGAAACTTGT TTTGACCAAGAGTGCAAAGGAATTTCTGGTTGAAAAAGGATTCGATCCAGTGTACGGTGCCAGACCTTTGAAGAGGGCGA TTCAGAGATACGTTGAAGATCCTCTCTCCGAGGAGATACTGAAGAGCAAGTTCGAAGAAGGAGACACGATCGTCTGCAGG GCTCACAAAGATGGTCTGAGATTCACGAAGAAGAAGGAAAAGAAAGAGAAGGTGGTCCAGTGA Protein sequence : MFDKFSEKTAQIFVTAQEEAKELGHSYVGTEHLLLAILKVDKGPAVEVLEEMGASYSKVRSEIISMVGMGMRGFVPSPQM TPRAKRVTELAYEEAKILGSDKINPEHILLGILREGEGIAIHILRKLGVDLNALRREIIDLYSYSSNKGLEYEEEEDYTY RSVKQLEGFGVNLTELAAKKELDPVIGREEEIERVMQVLVRRKKNNPVLIGDPGVGKTAIVEGLAQRIVAGDVPEILRNK VIFSLDVAALVAGTKYRGEFEKRMKKLLQIVTKDKNIILFIDEIHTIVGAGSAEGAIDAANILKPALARGEISCIGATTP DEYRKYIEKDAALERRFQKIYVKEPTEEETLEILKGLKKKYESHHRVIYTDKALEAAVYLSKRYITDHFLPDKAIDVIDE AGARARLKVFIIPPELKSIKNELEKIRTDKELAVLNQDYEKAAKLKEKEMELETEYRRKYAEWRRKAETAVVKVDVDDIA EVVSSWTGVPLKKIEETEVEKLLNLEEALHQRIVAQDEAIKAVARAIRRARSGLKDPRRPIGVFLFLGPTGVGKTELAKA LAEYLFGDERALIRFDMSEYMERFSVSRLIGAPPGYVGYEEGGTLTEKVRRRPFSVILFDEIEKAHPDVFNLLLQIMDDG RLTDSQGREVDFRNTIIIMTSNIGSSYINKSKRTLGFVGDDDEEKEFDKIKELVLDEVKRTFRPEFLNRIDETIIFHPLR KEHIEQIIDILLRDLRKRLAEKNMKLVLTKSAKEFLVEKGFDPVYGARPLKRAIQRYVEDPLSEEILKSKFEEGDTIVCR AHKDGLRFTKKKEKKEKVVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CTN_0488 | YP_002534030.1 | ATP-dependent Clp protease, ATPase subunit | VFG0079 | Protein | 0.0 | 56 |
| CTN_0488 | YP_002534030.1 | ATP-dependent Clp protease, ATPase subunit | VFG0080 | Protein | 8e-138 | 53 |
