Gene Information

Name : fliP (CTN_1887)
Accession : YP_002535429.1
Strain : Thermotoga neapolitana DSM 4359
Genome accession: NC_011978
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1843377 - 1844126 bp
Length : 750 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGAGGAAAATTCTTGTTTTTTTGCTGATACTTCTCTCGCTGATCTCTTTTTCCCAGGAGGTGCCCTTTCCCTCCATTTC
TATAGGCGTCAGACCCGCTGAAGAGCCAGAGGACCTTGTGGTCACCCTAGAAATTCTTCTCATTCTGACTGTATTGACGC
TGGCGCCTTCCATTCTTGTTCTCTTCACCTCGTTCACCCGAATCATCGTCGTTTTTTCTCTTTTCAGAAACGCCCTTGGA
ACAAGGCAAACTCCTCCAAACCAGGTCATGATAGGCCTTGCACTCTTTCTCACATTCCTCATCATGCAACCTGTCTGGAA
CGATATCTACAACAACGCCATAACGCCGTATCTGGAAAGGGAGATAGGATACCAGGAAATGTTTCAGAGAATCAACAACA
GAATCAGGGAGTTCATGATAAAGGAACTGAAGAACCACCACAACGAAGACAACGTCTTCATGCTCGCCCAAAATGCAAAC
CTCGAGATCACCAGAGTAGAAGAAGCACCAAATTCTGTGTTGATACCTGCCTTCGTCTTGGGCGAACTTGAGATTGCCTT
CAAGATGGGAGTGGTACTGTACGTTCCCTTCATAGTCATCGACATGATCGTGGCGAGCATTCTGCTCTCCATGGGCATGA
TCATGATACCACCCGTGTTCGTTTCTCTTCCGTTTAAAATACTGATCTTTGTGATGGCAAACGGATGGGACCTTCTCGTT
GAGGGACTGATAAAGAGTTTTGCGAGGTGA

Protein sequence : 
MRKILVFLLILLSLISFSQEVPFPSISIGVRPAEEPEDLVVTLEILLILTVLTLAPSILVLFTSFTRIIVVFSLFRNALG
TRQTPPNQVMIGLALFLTFLIMQPVWNDIYNNAITPYLEREIGYQEMFQRINNRIREFMIKELKNHHNEDNVFMLAQNAN
LEITRVEEAPNSVLIPAFVLGELEIAFKMGVVLYVPFIVIDMIVASILLSMGMIMIPPVFVSLPFKILIFVMANGWDLLV
EGLIKSFAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 5e-27 42
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 4e-27 42
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 4e-27 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_002535429.1 flagellar biosynthesis protein FliP VFG2338 Protein 5e-40 45
fliP YP_002535429.1 flagellar biosynthesis protein FliP VFG2016 Protein 6e-40 44
fliP YP_002535429.1 flagellar biosynthesis protein FliP VFG2494 Protein 3e-40 44
fliP YP_002535429.1 flagellar biosynthesis protein FliP VFG1259 Protein 9e-42 43