Gene Information

Name : CTN_1880 (CTN_1880)
Accession : YP_002535422.1
Strain : Thermotoga neapolitana DSM 4359
Genome accession: NC_011978
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1837379 - 1838056 bp
Length : 678 bp
Strand : +
Note : -

DNA sequence : 
TTGATCGAGGTACGAAACCTCTGGAAAGAGTACAACGGAAGAGACAGAGTAACCGCCCTCAAGGGAATAAATCTGAAGAT
AAACAGCGGAGAGTTCGTTGTGATACTGGGACCTTCTGGATCTGGAAAGACCACCCTTCTGAACTGTCTTTCCGGTGTAG
ATCGCCCAACGAAGGGAACTGTGATCATCGATGGAACAGATCTTTACGCCCTCTCCGAGGAAGAGAGAACAGGATTTAGA
GCAAAGAACATGGGATTCGTCTTTCAGTTCTTCAACCTTGTACCCGTTCTCACCGCACTCGAAAACGTAGAACTTCCTCT
TCTGATCTTAGGTGTGAACAGACGAGAAGCGAAAGAACGCGCGTTCGACATGCTGAGAAGAGTGGGACTTGCTCACAAGT
GGAACAGGTTCCCAGAAGAACTCTCCGGTGGTGAAAAACAGCGCGTTGCCATAGCGAGGGCCCTCGTCCACAATCCGAAA
GTGGTATGGGCAGACGAGCCCACCGGTGCCCTCGACAGCGAAACAGGAGGTATGATCATAGATCTACTCATGGAGATGAA
AAAGAACTCCACTCTGGTGATCGTGACACACGATGAAAGGATAGCAGAGAAGGCAGATCGGGTCATCAAAATAAGGGACG
GTCAGATCGTACAGGATATATACGAAACGGCGTTGTAG

Protein sequence : 
MIEVRNLWKEYNGRDRVTALKGINLKINSGEFVVILGPSGSGKTTLLNCLSGVDRPTKGTVIIDGTDLYALSEEERTGFR
AKNMGFVFQFFNLVPVLTALENVELPLLILGVNRREAKERAFDMLRRVGLAHKWNRFPEELSGGEKQRVAIARALVHNPK
VVWADEPTGALDSETGGMIIDLLMEMKKNSTLVIVTHDERIAEKADRVIKIRDGQIVQDIYETAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-36 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTN_1880 YP_002535422.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-44 48
CTN_1880 YP_002535422.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-38 46
CTN_1880 YP_002535422.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-36 45
CTN_1880 YP_002535422.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-39 44
CTN_1880 YP_002535422.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-39 42