Gene Information

Name : CTN_1702 (CTN_1702)
Accession : YP_002535244.1
Strain : Thermotoga neapolitana DSM 4359
Genome accession: NC_011978
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1665833 - 1668220 bp
Length : 2388 bp
Strand : -
Note : -

DNA sequence :
GTGAGACGTATGAGAAACCTGAACGACAAGATGAAGGATATCTTTGAAAAGAGTGTAGAGGATCTTAAGGACAGGAACCA
GAATTTACTCAGACCTGAGCACATTCTCCTTCAGCTCCTGTACGACGAAAACGAGGTCACAAAGATACTGGAAGAACTCA
ATGTGAACACGGAAGAGATCGCCGACGAACTGGAGAGCTACATCGATTCCCAGTACGGAATATTCTATGGATTCTCCGAT
CAGGTGTACGTTTCCAGGGAACTTTCGTACATCCTGGAACTGGCAAGAAAGGAAGCCAGGCTCTTCAAGCAGAAAGACGT
GGGGCCTCTTCACTTCCTTCTGGGACTCCTGAGGGACGGTTCAACGCATGCAGCGCGCGTTCTCAAAAAGTACGGAGTGG
ACTACGAAAGGGTGCTTCAGAAAGTGAAAGAGCACGAAGATGAGTTTATGGATAAGCAATCACCGATCACGGCGTTTGCC
ACAGATCTGACGAAGCTTGCCAGGGAAGGAAAGATTGGTCCCATTATAGGAAGGGAAAAAGAGATCGAGCGCGTGATCGA
GATTTTGATGAGGCGAACGAAAAACAACCCGATACTCATCGGAGATCCTGGAGTTGGAAAGACAGCCATCGTGGAGGGAC
TTGCGCAGAGGATCGTGGAAGGAAAAGTGCCCGATCCTTTGAAAGATGTGCGTGTGTTGATGGTCGACCTTGGCAGGATG
ATAGCTGGTACCAAGTACAGAGGTGAGTTCGAAGAAAGGCTGAAATCCTTCCTCGACGAAGTGATGAAACAGAAAGAAAA
AACCATTCTGTTCATCGACGAAATCCATACCATAGTTGGAGCGGGAGCAGCTGAAGGGGCAATGGATGCTGCCAACATGT
TGAAACCTGCCCTTGCCCGAGGTGAGATCAGGGTCATAGGAGCGACCACGCTGGATGAATACAGAAAACACATAGAAAAG
GACAAAGCGCTCGCAAGAAGATTTCAGCCGGTTCTGGTGAAAGAACCCAGTGTGGAAGAAACAATAGAGATCCTGAAAGG
TCTCAAGAGGGTTTATGAAGAACATCACAAGGTCAAAATAGAAGACGAAGCAATAGAGGCCGCTGCAAAGCTTTCTGCAA
GATACATAACAGACAGATTCCTCCCGGACAAGGCGATCGACCTGCTGGATGAAGCGGCTGCGAGGGTGAAACTGGGCTTC
TCAAAACAGGAAAAGGATGAGGCAAGGCTTCAGGAACTCGAAAGAAAGATAAAAGAGCTCGAGAACAGAATCGACGAGCT
CACCGTGAGGTCCCAGTACAAAGAAGCTGCGGATCTCAAGAAAGAACTTTTCAGACTGAAGAGCGAATACGAGTCCTTGA
AGAGTGGAAGACCGGTCGTCACAGCGGAGAAAATAGCGGAAGTTGTGGAATCCTGGTCTGGTGTGCCCGTGTCCAGGATA
GTGGAGTCGGAGAAGGAGAAGTTGCTCAAACTTGAAGAGATCATACATCAGAGACTGGTGGATCAGGAAGAGGCCGTCAG
GGTTGTGGCAGATGCCATAAGGAAAGCACGCGCGGGGATAAAAGATCCAAACAGGCCTGTTGGAACGTTCCTCTTTTTGG
GACCAACAGGGGTTGGAAAAACAGAACTCGCAAAAACACTCGCTGAGGTGCTCTTTGGAAGTGAAAACGCCCTCATTCGA
ATCGACATGAGTGAATACATGGAAAAGCATGCCGTTTCCAAACTGATTGGAGCACCACCGGGTTACGTAGGATACGAAGA
AGGTGGTCAGCTCACAGAGGCTGTGAGAAGAAGGCCGTACAGTGTGATCCTGCTTGACGAAATAGAAAAGGCTCATCCGG
ACGTGTTCAACATACTGCTTCAGATCATGGATGATGGCAGACTGACCGATGCCAAAGGAAACGTCGTGGATTTCAAAAAC
ACGATCATAATAATGACGAGCAACATAGCAAGCGATCTCATCCTGAACTTCGTCAGAGAAGGTAAAAGCTTTGAGGAGAT
CGAGGAAAAAGTGAGGGAGGAGTTGAAACACTACTTCAGACCGGAGTTCATAAACAGGATAGACCACGTGGTCGTGTTCA
AACCACTCACCAAGGAACACATGAAACAGATAGTGGAGATCATGTTGAAGAGACTCGAAGGTCGTTTGAAGGACAGAAAC
ATAAGACTGACCATCACCGATGCAGCAAAAGAGTACCTCGCAGAGAAAGGGTACGATCCAACGTTCGGAGCAAGACCGCT
GAGAAGGCTCATTGAAAGGGAGATAGAGACACCTCTGGCCAGGATGATCATAGCAGGCGAGGTCAAAGAAGGTCAGACGG
TAAGGGTGGACTTCGACGGTGAAAAACTGATACTCGAGGTTGCAAGAGAAGTTGAGAAAGTAAATTGA

Protein sequence :
MRRMRNLNDKMKDIFEKSVEDLKDRNQNLLRPEHILLQLLYDENEVTKILEELNVNTEEIADELESYIDSQYGIFYGFSD
QVYVSRELSYILELARKEARLFKQKDVGPLHFLLGLLRDGSTHAARVLKKYGVDYERVLQKVKEHEDEFMDKQSPITAFA
TDLTKLAREGKIGPIIGREKEIERVIEILMRRTKNNPILIGDPGVGKTAIVEGLAQRIVEGKVPDPLKDVRVLMVDLGRM
IAGTKYRGEFEERLKSFLDEVMKQKEKTILFIDEIHTIVGAGAAEGAMDAANMLKPALARGEIRVIGATTLDEYRKHIEK
DKALARRFQPVLVKEPSVEETIEILKGLKRVYEEHHKVKIEDEAIEAAAKLSARYITDRFLPDKAIDLLDEAAARVKLGF
SKQEKDEARLQELERKIKELENRIDELTVRSQYKEAADLKKELFRLKSEYESLKSGRPVVTAEKIAEVVESWSGVPVSRI
VESEKEKLLKLEEIIHQRLVDQEEAVRVVADAIRKARAGIKDPNRPVGTFLFLGPTGVGKTELAKTLAEVLFGSENALIR
IDMSEYMEKHAVSKLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVFNILLQIMDDGRLTDAKGNVVDFKN
TIIIMTSNIASDLILNFVREGKSFEEIEEKVREELKHYFRPEFINRIDHVVVFKPLTKEHMKQIVEIMLKRLEGRLKDRN
IRLTITDAAKEYLAEKGYDPTFGARPLRRLIEREIETPLARMIIAGEVKEGQTVRVDFDGEKLILEVAREVEKVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-153 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTN_1702 YP_002535244.1 ATPase AAA-2 domain protein VFG0080 Protein 1e-140 52
CTN_1702 YP_002535244.1 ATPase AAA-2 domain protein VFG0079 Protein 3e-169 51
CTN_1702 YP_002535244.1 ATPase AAA-2 domain protein VFG2084 Protein 4e-92 42