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Name : CTN_1131 (CTN_1131) Accession : YP_002534673.1 Strain : Thermotoga neapolitana DSM 4359 Genome accession: NC_011978 Putative virulence/resistance : Virulence Product : Lipopolysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1102733 - 1104553 bp Length : 1821 bp Strand : + Note : - DNA sequence : ATGGTGAACATGAGGAAACTGTTGCTGTTTCTTCTGGACGCAGGTCTTACCCTCTTTTCCGGTGTGGTGGCACTCTTTGC GAGGTTTGGGTTCAACTTTCAGGAAATGCTGCGATACGATGAATCGATCCTCATATACACGATCGTATCGATGGTTGTTT ACGTTCTGAATGGAAACTACTCCGTTGTGTGGGAGTACGCCAACGCAAGAGACTTTCTTCTGCTGATAAGGGGAAGTGTC ATATCGTACATCTCTGCTCTCGCTTTTTTCTACTTCTACCGCGATGTCGTTCTTCCTCGCTCCGTTGGTTTTGCCACCTT CCTTGGCTCCATGATTCTCATCGTTCTTAGCAGGATCACCTGGCAGTGGTTGACGTTGAGCCGCAAAGGACGACCCACAG AAAAGAGGATCATGATCATCGGGGCCGGTGACGCGGGTGTTTCCATCCTGGAAGAGTTCGAAAAGCACCCCCACCTTGGA AAAGTGGTTGCCTTCATGGATGACTCACCACGGAAGATAGGAAGAAGGGTCAGGGGAATTCCCGTCTTTGGCCCCATCGA CAGAACGATGGAGTACGTTGAAAGGCTGGGTGTGGATGAAGTCATCGTGGCCATCCCGTCTGCCACAAAACAGCAGATGG AACGTATCCTTGGAAGCATTGACCTGAAAAAAGTCAAGGTGAAAACCCTTCCGAGCATCAGAGAGTTGATGGAGGATCGG GTGAGACTCTCTCACCTGAAGGACATATCGATAGAGGATCTTCTTGGAAGAGAAGAGGTAAAGATCGACGTGCGTGGAAT AGAGAATCTTTTGAAAGGAAAGAGAATCCTTGTGACGGGAGCTGGGGGGAGTATAGGATCTGAGCTCTGCAAGCAGATAG CGAAGATGAATCCTGAAGAACTCATCCTCCTGGGACACGGTGAGAACAGCATCTACCTGATAGACGAATTCCTCAGTGAG AATTTCCCGAATCTGAAGAAAAAAAGGGTAATAGCGGACGTTGCCTGTGAGAATCTCATGGAGCTTTGGATGTCAAGGCT GAAACCGGATATCGTCTTTCATGTGGCTGCCCACAAGCACGTACCATTGATGGAGGAAAACCCGCTGGAGGCTTTCCGGG TGAACACCCTCGGAACGATCAACCTGGTGGAACTCTCCAGAAAGATGAAGGTGAAACACTTCGTCTTCATCTCCACCGAC AAGGCTGTGAATCCCACCTCCGTAATGGGCCTCACAAAAAGGATCTCGGAGCTTTACATTATGACACAGGATACAGACGA TACGAAATTTTCGATCGTGAGATTCGGAAACGTCCTGGGAAGCCGAGGGAGTGTAGTGGAGAAGTTCAGGCGGCAGATAG AAAAGGGTGGCCCGGTGACCGTGACAGATCCGAGAATGAAGAGATACTTCATGTCCATACCGGAAGCGGTATCCCTCATC CTCCAATCTCTCCTGTACTCGTCCGGTAACGACCTTTTCATCCTCGATATGGGGGAGCAGATACCCATTGTGAAACTTGC AGAAACGATGATCATGCTCTCAGGATTCGTACCTCACCAGGACATAAAGATCGTCTACACCGGCGTCAGGCCAGGAGAGA AGATGTACGAAGAACTCACCTATCCTTATGAAAGAAAAGAATTCACACCTCACCCGAAGATATTCAGGGTGAAATCTGAT TCTCTACCCTCCAGGGAAACGGTCCTTGAAGCGATTCTTTCCATGAAAAGTGCCCTTGAAAGAAAAGACGTGAATGCCCT CCTTTCTGAGATGATGAGACTCGTTCCGGAGGCAAAGTTGAATGACGGAGTTCTTGACTAG Protein sequence : MVNMRKLLLFLLDAGLTLFSGVVALFARFGFNFQEMLRYDESILIYTIVSMVVYVLNGNYSVVWEYANARDFLLLIRGSV ISYISALAFFYFYRDVVLPRSVGFATFLGSMILIVLSRITWQWLTLSRKGRPTEKRIMIIGAGDAGVSILEEFEKHPHLG KVVAFMDDSPRKIGRRVRGIPVFGPIDRTMEYVERLGVDEVIVAIPSATKQQMERILGSIDLKKVKVKTLPSIRELMEDR VRLSHLKDISIEDLLGREEVKIDVRGIENLLKGKRILVTGAGGSIGSELCKQIAKMNPEELILLGHGENSIYLIDEFLSE NFPNLKKKRVIADVACENLMELWMSRLKPDIVFHVAAHKHVPLMEENPLEAFRVNTLGTINLVELSRKMKVKHFVFISTD KAVNPTSVMGLTKRISELYIMTQDTDDTKFSIVRFGNVLGSRGSVVEKFRRQIEKGGPVTVTDPRMKRYFMSIPEAVSLI LQSLLYSSGNDLFILDMGEQIPIVKLAETMIMLSGFVPHQDIKIVYTGVRPGEKMYEELTYPYERKEFTPHPKIFRVKSD SLPSRETVLEAILSMKSALERKDVNALLSEMMRLVPEAKLNDGVLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-72 | 44 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-76 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CTN_1131 | YP_002534673.1 | Lipopolysaccharide biosynthesis protein | VFG1300 | Protein | 7e-79 | 42 |
