Gene Information

Name : BCQ_PI125 (BCQ_PI125)
Accession : YP_002533302.1
Strain :
Genome accession: NC_011973
Putative virulence/resistance : Unknown
Product : group II intron reverse transcriptase/maturase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3344
EC number : -
Position : 134553 - 136481 bp
Length : 1929 bp
Strand : -
Note : -

DNA sequence :
ATGAATGATAGAACTAAGTCCACGCCAAAGAATAAGAAACTAAGACACAACGAATACTACGGTATCCAAACTTTCTTAGA
TAACTTATACCAGAAGGCAACAAAGAAAAATTCTTTTAAAAATTTAATGCCTATCATTATATCAGATGAAAATATACTCC
TCGCGTTTCGTAATATTAAAGGAAACAAAGGGAGTAAAACAGCAGCTTGTGACAATGTAAACATTAAGGATATTGAGAGA
ATGGAACAAAGCTATTTCTTGAACGAAGTAAAAAGACGCTTTCAAAACTACCAACCGCAGAAAGTAAGGCGCAAGGAAAT
ACCGAAACCCAATGGGAAAACCAGACCTCTGGGAATACCAAGTATGTGGGATAGGATTATCCAACAATGCATCTTACAAG
TAATGGAGCCTATCTGTGAAGCACACTTCTGTAACCGAAGTCATGGATTTCGCCCAAACAGAAGTGCTGAAAATGCTATA
GCAGACGCAACAAAACGGGTAAATCAGCAAAACCTTACATATGTGGTGGATATAGACATTCAGGGATTCTTTGACGAAGT
AAGTCACGTCAAACTCATGCGCCAACTATGGACACTGGGTATTCGTGACAAACAACTACTAGTCATTATCCGGAAAATAT
TGAAAGCGCCAGTGCAACTGCCTAACGGCAAAACGATATTTCCGACCAAAGGTACCCCGCAAGGTGGTATCCTTAGTCCA
CTACTCGCCAATGTTAACCTTAACGAATTTGACTGGTGGATTAGTAATCAATGGGAAACTTTCAAAGCCAAGAAGGTAAA
GCCGAGATTGAAAGATGGGATTTGGAGTAATGACACTGTAACATATTGTCTATCCAAAACATCCAAGATGAAACCAATGT
ATATCGTAAGATACGCAGATGATTTTAAAATCTTTACAAATACACGTAGGAATGCGGAGAAAATTTTCGAAGCAACTCAA
ATGTGGTTAGAAGAACGTCTAAAACTGCCTATCTCAACCGAAAAGTCTAAAGTAACCAATCTGAAAAAGCAACAGAGTGA
ATTCTTAGGTTTCACTCTTAAGGCTGTAAAGAAAGGTAAGAAGAACGGTAACACACGATACATTGCAGTAACACACATCT
CTCCAAAAGCACTGGAAAAAACAAAACAAGATTTAGCAAAACAAGTGAAAAGGATACAGAGAACCCCAAACTCTAATGAA
ACAATTAAGAGAATCAGTATATACAACAGCATGGTCATTGGTAAGCACAACTATTATAAAATAGCAACGCATGCTTCCCT
GGATTTCAGTAAAATGAACCATAGTCTTGGTCACATGATGTATAACAGATTCCCAAAGTCAAAAATTAGAGGAAAAAGCA
ACACAAACGGATACACGAATATAGGGAAATATAAAGGGAAAGACAGAGGTATTAAACCATACCTAAAGTCAAAAGCGATG
AGATTTCTCATGAAATGTCCTATTTTACCAATCTCCTATATTCAACACAAAAAACCGATGATGAAAAAGCAATCTATTAA
CAGATACACCGCAGAAGGACGAGCCCTTATACACAAAAACTTGGCAGAAATAACCGAAGCGGAACTGAAATGGTTAAGAG
AAAACCCAGTTATAAATGAACGGGCAACCATAGAATACAATGATAATCGAATTTCTCTTTATATTGCACAAAAAGGAAGA
TGCAGTGTAACAGGTGAGAAACTCTCGCCTTGGGACATCCACTGTCACCATAAGCGATTATGGAGTGAAACAAGGGATGA
CAGCTACAAAAATCTTACCATCATCAAGCCAAGTGTCCATACACTAATACACGCGACCAATATAGAAACCATAAACCAAT
TCCTCAATAAATTAAAACTCAACGAGGAACAGTTAGGCAAACTTAATAAATTGCGGAAATTAGTCAAAAATGAGGAAATC
TGTATGTAA

Protein sequence :
MNDRTKSTPKNKKLRHNEYYGIQTFLDNLYQKATKKNSFKNLMPIIISDENILLAFRNIKGNKGSKTAACDNVNIKDIER
MEQSYFLNEVKRRFQNYQPQKVRRKEIPKPNGKTRPLGIPSMWDRIIQQCILQVMEPICEAHFCNRSHGFRPNRSAENAI
ADATKRVNQQNLTYVVDIDIQGFFDEVSHVKLMRQLWTLGIRDKQLLVIIRKILKAPVQLPNGKTIFPTKGTPQGGILSP
LLANVNLNEFDWWISNQWETFKAKKVKPRLKDGIWSNDTVTYCLSKTSKMKPMYIVRYADDFKIFTNTRRNAEKIFEATQ
MWLEERLKLPISTEKSKVTNLKKQQSEFLGFTLKAVKKGKKNGNTRYIAVTHISPKALEKTKQDLAKQVKRIQRTPNSNE
TIKRISIYNSMVIGKHNYYKIATHASLDFSKMNHSLGHMMYNRFPKSKIRGKSNTNGYTNIGKYKGKDRGIKPYLKSKAM
RFLMKCPILPISYIQHKKPMMKKQSINRYTAEGRALIHKNLAEITEAELKWLRENPVINERATIEYNDNRISLYIAQKGR
CSVTGEKLSPWDIHCHHKRLWSETRDDSYKNLTIIKPSVHTLIHATNIETINQFLNKLKLNEEQLGKLNKLRKLVKNEEI
CM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0012 AAM75218.1 EF0012 Not tested Not named Protein 2e-134 50
EF2326 NP_815981.1 group II intron reverse transcriptase maturase Not tested Not named Protein 8e-140 48