Gene Information

Name : BCQ_PI108 (BCQ_PI108)
Accession : YP_002533285.1
Strain :
Genome accession: NC_011973
Putative virulence/resistance : Unknown
Product : istB protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 116983 - 117747 bp
Length : 765 bp
Strand : -
Note : similar to Escherichia coli plasmid R68.45 insertion sequence IS21

DNA sequence :
ATGATGAACGAACTCTTATTGGAGCGTTTAAAGAAGCTCGGCTGGCATCATACAGCCAACCAACTTGATAGTTTACTAGA
AGACGCTTCTAAGGATAATGTATCATATTCTGAGTTTCTTCACACTATCGTTTTGCATGAAACGGAGCAACAAGATTCTG
ATCAACTAGAAAAGCGAATGAAACGGGCAAAGCTGCCTTACACCAAAACGATTCATGATTTTGACTTTACATTTCAACCA
AGTCTGAGCGAGAAAAGGGTCAAGGAAACCTTAACATGTCGCTTTATTGCCAATGGGGAAAATCGCATATTACTGGGTCC
TCCGGGTGTAGGAAAAACTCATTTAGCCGTCTCCTTTGCGATTGAAGCGATTACCCAAGGATATACAGCCCTATTTTTGT
CGGCCGACGACTTAGTGGCTCAGTGCCGCAAGGCCAATGATAAAGGGACACTCCAGCGACTCGTAAATCGTTGGAGTCGT
CCAGACGTGTTAATTGTAGATGAAGTAGGTTATTTTCCTTTTGATGAACTAACCGCCAATGTTTTCTTCCAGGTTGTTTC
AAAGCGATACGAACAAGGAGCAATGATTTTAACATCTAATAAATCGTACCTTGAATGGGGAAAAGTTTTTGGTGACGATG
TATTGGCAACGGCTATCTTGGATCGCCTCTTACATCATGCGATTACATTTAACATCAAGGGTGACTCCTACCGTTTGCGA
GAAAAGAAAAAAGCAGGAATTTATCCTGCCCAAACAACGATTTAG

Protein sequence :
MMNELLLERLKKLGWHHTANQLDSLLEDASKDNVSYSEFLHTIVLHETEQQDSDQLEKRMKRAKLPYTKTIHDFDFTFQP
SLSEKRVKETLTCRFIANGENRILLGPPGVGKTHLAVSFAIEAITQGYTALFLSADDLVAQCRKANDKGTLQRLVNRWSR
PDVLIVDEVGYFPFDELTANVFFQVVSKRYEQGAMILTSNKSYLEWGKVFGDDVLATAILDRLLHHAITFNIKGDSYRLR
EKKKAGIYPAQTTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 5e-40 44
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 5e-40 44
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 5e-40 44
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 1e-32 44
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-39 43
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-39 43
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-39 43
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-39 43
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-39 43
unnamed CAA21402.1 - Not tested HPI Protein 2e-39 43
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-39 43
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-39 43
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-38 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BCQ_PI108 YP_002533285.1 istB protein VFG1460 Protein 6e-33 44
BCQ_PI108 YP_002533285.1 istB protein VFG1515 Protein 9e-40 43
BCQ_PI108 YP_002533285.1 istB protein VFG1627 Protein 9e-40 43
BCQ_PI108 YP_002533285.1 istB protein VFG1606 Protein 9e-40 43
BCQ_PI108 YP_002533285.1 istB protein VFG1663 Protein 6e-39 43