Gene Information

Name : rph (BCQ_4286)
Accession : YP_002532001.1
Strain : Bacillus cereus Q1
Genome accession: NC_011969
Putative virulence/resistance : Unknown
Product : ribonuclease ph
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : -
Position : 4194088 - 4194825 bp
Length : 738 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGAGTAGATGGTAGAGAAAAAACAGAATTACGCCATATACATATTCATACGAATTATTTAAAACATCCAGAAGGATC
AGTGTTAATTGAGGTTGGGGATACAAAGGTAATTTGCTCAGCGACAATTGAAGAGCGCGTCCCGCCTTTTATGCGTGGAG
AAGGAAAGGGCTGGGTAACAGCTGAATATGCGATGATTCCACGTGCGACAGAACAACGTACAATTAGGGAGTCAAGTAAA
GGGAAAGTAACAGGACGTACAATGGAAATCCAGCGCTTAATTGGACGAGCATTACGTGCGGTAGTTGACTTAGAAGCGCT
TGGTGAGAGAACGGTTTGGATTGATTGTGATGTTATTCAAGCGGATGGTGGAACGCGAACTGCTTCTATTACAGGTGCAT
ACGTAGCGATGGTATTAGCGTTTGAGAAGTTATTACAAGCAGAAAAAGTATCTAAAATTCCAGTAAAAGATTATTTAGCA
GCAACGTCAGTAGGGATTGTTGAAGAGCAAGGTGTTGTTTTAGATTTGAACTATGCAGAAGATTCTAAAGCAGACGTTGA
TATGAACGTAATTATGACTGGAAAAGGTCAGTTCGTTGAAGTGCAAGGAACTGGAGAAGAAGCGACGTTTAGTAGAGCGC
AGTTAAATGAATTACTTGATGCTGCAGAACAAGGCATTTTCCAACTGATTGATATGCAAAAAGAAGCGTTAGGTGACATC
GTATCTCATATAGAGTAG

Protein sequence :
MRVDGREKTELRHIHIHTNYLKHPEGSVLIEVGDTKVICSATIEERVPPFMRGEGKGWVTAEYAMIPRATEQRTIRESSK
GKVTGRTMEIQRLIGRALRAVVDLEALGERTVWIDCDVIQADGGTRTASITGAYVAMVLAFEKLLQAEKVSKIPVKDYLA
ATSVGIVEEQGVVLDLNYAEDSKADVDMNVIMTGKGQFVEVQGTGEEATFSRAQLNELLDAAEQGIFQLIDMQKEALGDI
VSHIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 4e-60 58