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Name : RSKD131_0567 (RSKD131_0567) Accession : YP_002524928.1 Strain : Genome accession: NC_011963 Putative virulence/resistance : Resistance Product : major facilitator superfamily protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 562053 - 563273 bp Length : 1221 bp Strand : - Note : - DNA sequence : ATGCCCCAGCCCCGGCTCGCCCTTGCCTTCATCCTGATCACCGTGGCGCTTGACGCGATCGGGATCGGGCTGATCTTTCC CGTGATGCCCGACCTCATCCTCGAGATCACGGGCCAGCCGCTGTCCGAGGCGGCGGTCTGGGGCGGCCTTCTGTCGGCCT CCTTCGCCGTCATGCAGTTCCTGTTCGGCCCGACCATCGGCAGCCTCTCCGACCGGTTCGGCCGGCGGCCGATCCTGCTC GGCTCGCTCGTCCTCATGTCGGCCACCTATCTCGCCATGGCGCTCGCCCCCACGATGGCGATCCTGCTCGCGGCGCGGAT CGTGGCGGGGATCGTCTCGGCCACCTATGCCACCGCCTCGGCCTTCATCGCCGACGTGACCCCGCCCGAGGACCGCGGCA AGCGCTTCGCCCTCGTGGGCGCAGGCTTCGGGATCGGCTTCGTGCTGGGGCCGGCGCTGGGGGGCCTTCTGGCGGGGCTC GACACGCGCGCGCCCTTCTATGCGGCGGCGCTGATGGCGCTGCTCAACCTCGCGCTCGGAAGCCTCATCCTGCCCGAGAC GGTGACGGACGCCACCCGCCGCGCCTTCACGCTCTCGCGCGCGAACCCTCTGGGTGCCCTGCGCGCGGTCGCCCGCCTTC CCGGCCTCAGCCGTCCGCTCGCCGTGTTCCTGATCCTCGGGATCGCCATGAACGTCTATCCGGCGGTCTGGGCCTTCTAT GGACAGGCGCAGTTCGGCTGGGGCGCGGGCATGGTCGGGGCGTCCCTCGCGCTCTATGGCATCAGCTTTGCGGTGGGACA GGTGGCGCTGGTGGGGCCGGCGATCCGGCACCTCGGCGAGCACCGCACGGCGCTGGTGGGGATCTGGGTCGACATCGTCA CCCTGGCGGCTCTCGGCGTCCTAGCATCGGGCACGGGCGCGCTCTTCGTCATCCCGGTGACGGCGCTCGGCGGCGTGGTG GTGCCCGCGCTCCAGTCCATCCTGTCGCGCGCCACTCCGGCGGATGCGCAGGGAGAGCTGCAGGGCGTGCTGGCCTCGCT GAACGCCATCGCCATGATCGCCTCGCCGCTGGTCATGACCGCGACCTTCCGCGCCTTCACCGCGCCGGGCGCGCCGCTGC ACCTGCCCGGCGCGCCGTTCCTGCTCGCCTCGCTGCTGATGGTGAGCGCGCTGGCGCTGCACGTCCGGGGGGCGGGACAG CCGGAGAGAGACGCGGCCTGA Protein sequence : MPQPRLALAFILITVALDAIGIGLIFPVMPDLILEITGQPLSEAAVWGGLLSASFAVMQFLFGPTIGSLSDRFGRRPILL GSLVLMSATYLAMALAPTMAILLAARIVAGIVSATYATASAFIADVTPPEDRGKRFALVGAGFGIGFVLGPALGGLLAGL DTRAPFYAAALMALLNLALGSLILPETVTDATRRAFTLSRANPLGALRAVARLPGLSRPLAVFLILGIAMNVYPAVWAFY GQAQFGWGAGMVGASLALYGISFAVGQVALVGPAIRHLGEHRTALVGIWVDIVTLAALGVLASGTGALFVIPVTALGGVV VPALQSILSRATPADAQGELQGVLASLNAIAMIASPLVMTATFRAFTAPGAPLHLPGAPFLLASLLMVSALALHVRGAGQ PERDAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 1e-39 | 41 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 8e-40 | 41 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 8e-40 | 41 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 8e-40 | 41 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 8e-40 | 41 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 6e-40 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RSKD131_0567 | YP_002524928.1 | major facilitator superfamily protein | AY264780.2.gene3.p01 | Protein | 2e-51 | 45 |
| RSKD131_0567 | YP_002524928.1 | major facilitator superfamily protein | Y19114.gene.p01 | Protein | 2e-46 | 43 |
| RSKD131_0567 | YP_002524928.1 | major facilitator superfamily protein | AF090987.gene.p01 | Protein | 2e-42 | 43 |
| RSKD131_0567 | YP_002524928.1 | major facilitator superfamily protein | X75761.gene.p01 | Protein | 4e-40 | 41 |
| RSKD131_0567 | YP_002524928.1 | major facilitator superfamily protein | AF534183.gene.p01 | Protein | 4e-40 | 41 |
| RSKD131_0567 | YP_002524928.1 | major facilitator superfamily protein | NC_010410.6002597.p0 | Protein | 4e-40 | 41 |
| RSKD131_0567 | YP_002524928.1 | major facilitator superfamily protein | CP001485.1.gene2821. | Protein | 4e-40 | 41 |
