Gene Information

Name : RSKD131_2732 (RSKD131_2732)
Accession : YP_002527093.1
Strain :
Genome accession: NC_011963
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 2774557 - 2775867 bp
Length : 1311 bp
Strand : +
Note : -

DNA sequence :
ATGTCGGGTGAATTTGACGGACTTCTGGCGGAGATCGCGGCAATTCCGCTCAGCCGCCGCTATGGGCGCGTGACCGGGAT
CGGCCGGGGAACCCTGTCCGTCGGAGGCCTCGAGCAGGGCACCGCGCTGGGCGACCGGGTGGAAATCTGCGGCGCGGGCG
GCATCCTCGGCGGCGAGGTTCTGCGGCTTTCGTCGCACGAGGTGACGATCCTGCCCGACGGCAGCCCGGAAGGCCTTGCA
ATCGGCGATGCTGTTGCTCTCATCGGCCCCGCAGAGATTGCGCCGGACGATAGCTGGATCGGCCGGATCGTCGATCCGCT
CGGCCGCCCGCTCGACGGGCGCCCGCTGTTTCGCGGCCCGCGTGCGCGTCCGTTGCGCGCGGCCGCGCCGCCGGCGGCGG
CCCGCCGCAGCCTCGGGCCGCGGCTTCCCACCGGAGTTGCGGTCTTCGACACGCTGCTGCCTCTTGTCCAGGGGCAGCGG
ATCGGGCTCTTCGCGGGGTCAGGGGTGGGGAAGTCCTCGCTTCTCGCCAAGTTCGCGCGGAGCGTCGTGGCCGACGTGGT
GGTGATCGGGCTCGTGGGCGAGCGCGGTCGCGAGCTCCGCGAGTTCACCGAGCGGGTGCTCGGGCCTGCAGGCATGGCGC
GTGCGGTGGTTGTGACGGCCACCTCCGATCAGTCGCCGCTGGTTCGCCGTCGCTGCGGCTGGGCGGCCATGGCGGTGGCC
GAGCATTTCCGCGACCAGGGGCTTCATGTGCTGCTCCTCGTCGATTCGATCACCCGTTTTGCCGAAGCTCATCGCGAGGT
CGCGCTCGCGGGCGGCGAGGCGGCGAGTATGAGGGGCTTTCCCCCGTCGACAGCCCACACGATCATGGCCCTGGCCGAAC
GCGCCGGACCGGGCGCGGACGGCACAGGCGACATCACGGCGGTCTTCTCGGTTCTCGTGGCCGGCTCCGACATGGAGGAG
CCGGTGGCCGATATTCTCCGCGGGGTGCTCGACGGCCATGTGGTGATGGATCGCAAGATCGCCGAGCGCGGACGCTTTCC
GGCGATCGACCTGCTGCGATCCATGTCGCGGGCCCTGCCTGAGGCCGCGAGCACGGCCGAAAATGCGCTCATCGCCGAGG
CGCGTCGGCTGCTCGGGGCCTGGGACCGTGCCGAGATGATGATCCAGGCGGGGCTCTATGCCAGAGGATCCGATCCGCTC
GTGGATGCGGCGATCCGGGTCTGGCCCGCGCTCGACGCCTTTCTGGCCGAGGATGCGCCGGACGGCATCGACACCAGTTT
CCGCCGCCTGGCCGACTGTCTCGGGCTCTGA

Protein sequence :
MSGEFDGLLAEIAAIPLSRRYGRVTGIGRGTLSVGGLEQGTALGDRVEICGAGGILGGEVLRLSSHEVTILPDGSPEGLA
IGDAVALIGPAEIAPDDSWIGRIVDPLGRPLDGRPLFRGPRARPLRAAAPPAAARRSLGPRLPTGVAVFDTLLPLVQGQR
IGLFAGSGVGKSSLLAKFARSVVADVVVIGLVGERGRELREFTERVLGPAGMARAVVVTATSDQSPLVRRRCGWAAMAVA
EHFRDQGLHVLLLVDSITRFAEAHREVALAGGEAASMRGFPPSTAHTIMALAERAGPGADGTGDITAVFSVLVAGSDMEE
PVADILRGVLDGHVVMDRKIAERGRFPAIDLLRSMSRALPEAASTAENALIAEARRLLGAWDRAEMMIQAGLYARGSDPL
VDAAIRVWPALDAFLAEDAPDGIDTSFRRLADCLGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-58 42
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-58 42
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-57 41
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-57 41
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-57 41
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 8e-48 41
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 9e-48 41
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 9e-48 41
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSKD131_2732 YP_002527093.1 FliI/YscN family ATPase VFG0390 Protein 4e-55 42
RSKD131_2732 YP_002527093.1 FliI/YscN family ATPase VFG0192 Protein 1e-49 41
RSKD131_2732 YP_002527093.1 FliI/YscN family ATPase VFG0048 Protein 6e-55 41