Gene Information

Name : RSKD131_2324 (RSKD131_2324)
Accession : YP_002526685.1
Strain :
Genome accession: NC_011963
Putative virulence/resistance : Virulence
Product : DNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 2358916 - 2359095 bp
Length : 180 bp
Strand : -
Note : -

DNA sequence : 
GTGATCGACAAGCACCTTCGCCGCCCCGCCGTTGAAGAAGCCACTGGCCTTAGCCGCTCGGCGATCTACGAGCTGATGAG
CAAAGGCCAGTTTCCGCGCCCGGTGAAGCTGACCGGCAAGGCCGTCGCCTGGCCCGAAAGCGCCATCGCTGAATGGCTCG
CGCAACGCGCCGCCGCCTAA

Protein sequence : 
MIDKHLRRPAVEEATGLSRSAIYELMSKGQFPRPVKLTGKAVAWPESAIAEWLAQRAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 3e-06 50
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 8e-08 49
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 1e-07 48
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 9e-08 48
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 1e-07 48
unnamed CAA21398.1 - Not tested HPI Protein 8e-08 47
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 5e-08 47
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 6e-08 45
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 6e-08 45
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 3e-08 45
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 6e-10 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSKD131_2324 YP_002526685.1 DNA-binding protein VFG1118 Protein 4e-08 48
RSKD131_2324 YP_002526685.1 DNA-binding protein VFG1141 Protein 2e-08 45