Gene Information

Name : RSKD131_2277 (RSKD131_2277)
Accession : YP_002526638.1
Strain :
Genome accession: NC_011963
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2307601 - 2308494 bp
Length : 894 bp
Strand : +
Note : -

DNA sequence : 
ATGAGACCGGAGATCCCCTCGGCCGGGGCGGAGGCGGGCGCGGGCATCTCGGTCCGCGACGTGACGGTGACCTACCGCAA
CGGCCATACGGCGCTGCGCCATGCGAGCTTCTCGCTGCCGCGCGGGACGGTGGCCGCGCTCGTGGGCGTCAACGGGGCGG
GCAAGTCCACGCTCTTCAAGGCCATCATGGGCCTCGTGCCGGTGGGCTCGGGCGAGATCCGGCTGCTCGGCCGCACCGTG
CCCGAGGCGCTGCGGCAGAATCTCGTGGCCTACGTGCCGCAATCCGAGGAGGTGGACTGGACCTTCCCGGTCCTCGTCGA
GGATGTGGTGATGATGGGCCGCTACGGCCACATGGGCTTCCTGCGGCGCCCGAAGGCCGCCGACCGCGCCGCCGTGGCCG
AGGCGCTGGCCCGCGTCGGCATGGAGGGGCTGCGCCACCGCCAGATCGGCGAGCTCTCGGGCGGTCAGAGGAAGCGCGTG
TTCCTCGCCCGGGCGCTGGCACAGGAGGGGCAGGTGATCCTGCTCGACGAGCCCTTCACCGGCGTCGATGTCCAGACCGA
GGGCGAGATCGTGGCCCTCCTGCGCGAGCTGCGCGCCGAGGGGCGGGTGATGCTGGTCTCGACCCACAATCTCGGCTCGG
TGCCGGAATTCTGCGACCGCACCGTGCTCGTGAAGGGCACTGTGCTGGCCTACGGGCCCACCGAGACCACCTTCACCCAT
GCCAATCTCGAAGCGGCCTTCGGCGGCGTGCTCCGGCGCTTCACCCTGTCGGGCACGCTCCTCCATGACGACGACGACCC
GCGCGAGGTCAGCATCCTCACCGACGACGAGCGGCCCTTCGTGCAGTATGGCGGCCGCACCCACCGGCAGGAGGCCGAGG
ATGAGCGCGGCTGA

Protein sequence : 
MRPEIPSAGAEAGAGISVRDVTVTYRNGHTALRHASFSLPRGTVAALVGVNGAGKSTLFKAIMGLVPVGSGEIRLLGRTV
PEALRQNLVAYVPQSEEVDWTFPVLVEDVVMMGRYGHMGFLRRPKAADRAAVAEALARVGMEGLRHRQIGELSGGQRKRV
FLARALAQEGQVILLDEPFTGVDVQTEGEIVALLRELRAEGRVMLVSTHNLGSVPEFCDRTVLVKGTVLAYGPTETTFTH
ANLEAAFGGVLRRFTLSGTLLHDDDDPREVSILTDDERPFVQYGGRTHRQEAEDERG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-83 72
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-83 72
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-83 72
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-83 72
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-83 72

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSKD131_2277 YP_002526638.1 ABC transporter BAC0350 Protein 7e-84 72
RSKD131_2277 YP_002526638.1 ABC transporter BAC0440 Protein 4e-84 64
RSKD131_2277 YP_002526638.1 ABC transporter BAC0400 Protein 1e-46 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSKD131_2277 YP_002526638.1 ABC transporter VFG0526 Protein 7e-84 72