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Name : trd_A0828 (trd_A0828) Accession : YP_002524110.1 Strain : Genome accession: NC_011961 Putative virulence/resistance : Unknown Product : AMP-dependent synthetase and ligase Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG0318 EC number : - Position : 813577 - 815259 bp Length : 1683 bp Strand : - Note : identified by match to protein family HMM PF00501 DNA sequence : ATGCAGACACGGACGACGCCGCTCTTCCAACAGCTCTGGTCGCGGCCCCAATGGGAGGGGCTCCCGCCCTATCGCTCGCT CCTGACACCGCTCATGCTGCTGGAGCGGACGTTGCACGTCTTTCCCGACAAGGTCGGAGTGGTGGATGGAAACCGGCGGT TGACGTACCGCGAGTTCGGTGCCCGCGTCTACCGGCTCGCCAGCGCACTGCGCGGTCGGGGCTTGCAGCCGGGCGATCGG GTCGCTGTCCTGTGCCGGAACAGCTTGGAGGCGCTGGAGGCCCACTTCGCCGTACCCCAAATGGGTGGGGTCCTGGTTCC GATCAACGTGCGCCTTTCGAGCGAGGAGGTGCGCTACATCCTGGAGCACTCAGGCGCCCGAGCGCTGATCCTGGACGGAG CACTGGCGAGCCTCGTCGAGCCGATCCGGGGAGCCCTTCCGGAACTCAGGCTCGTCGTCTGGGCCGATATCGATAGCCGT CACGGCGATGCGCCGCCGGCTCGCGCATCGTTTGCCGATGTCGAGTACGAGGCACTGCTGGCGGAAGGCTCACCGGATCC ATCGGTGTACCCGCTCCGTGACGAGGAGGAGGTGCTGAGCATCAACTACACGAGCGGGACGACCGGTCGGCCGAAGGGTG TGATGGTGACGCATCGCGGCGCGTACTTGAACGCGTTGGGGGAGATCATCGAGGCCCGACTCGTGCCGGAAAGCGCCTAT CTCTGGACGTTGCCGATGTTCCACTGCAATGGCTGGTACTTCCCGTACGCTGTGACCGGGATCGGAGCGACGCACGTGGT GCTGCCCAAGGTCGATCCGTCCCGCATCTTCCAGCTGATCGAGCAGGAAGGCGTGACGCATTTCTGCGGTGCGCCGACTG TGCTGATCATGCTGTTGCAAGGACGGCCGAGTCCCGACTACCGGTTCCCCAGACCGCTCACCGTGCTGACCGCGGCGGCA CCACCGGCGCCAGCGACGATCGCCGCGATGGAAGCGATGGGTGCCCGCATCGTGCACGTCTATGGCCTGACCGAAACGTA CGGTCCGCACACCGTCTGTGAGTGGCACGAGGAGTGGGACGCCTTGCCATTGGAAGAGCGTGCGCGACTCAAGGCACGGC AAGGTGTGGGATACATCCATGCGCCGGAACTGCGGGTGGTCGACGAGGCGATGCGCGATGTCCCAGCGGACGGGGAGACG CTGGGTGAAGTGGTCATGCGTGGCAACAACGTGATGAAGGGGTATTACCGCGACGAGGAGGCGACCGCTCGGGCGTTCGC TGGCGGCTGGTTCCACTCCGGTGACCTGGCGGTGGTGCATCCGGATGGGTACATCGAGCTGCGCGATCGCAAAAAGGACA TCATCATCAGCGGTGGGGAGAACATCTCGACGATCGAGGTCGAGCGTGCGCTCTACCAGCATCCCGCGGTGCTGGAGTGC GCGGTCATCGGTATTCCAGACGAGAAGTGGGGCGAGGTACCGAAAGCGTTCGTCGTACTGAAGCCAGGAATGCACGCGAC GCCGGAAGAATTGATCGCATTCTGCCGGGACCGTCTGGCCCACTACAAGTGCCCGAAGCAGGTCGAGTTGGTCGAGAGCT TGCCCAAGACCTCGACGGGGAAGATCCAGAAGTTCGTGCTGCGCGAGCGAGAGTGGGCTGGCTACGACAAGCGGATCCAC TGA Protein sequence : MQTRTTPLFQQLWSRPQWEGLPPYRSLLTPLMLLERTLHVFPDKVGVVDGNRRLTYREFGARVYRLASALRGRGLQPGDR VAVLCRNSLEALEAHFAVPQMGGVLVPINVRLSSEEVRYILEHSGARALILDGALASLVEPIRGALPELRLVVWADIDSR HGDAPPARASFADVEYEALLAEGSPDPSVYPLRDEEEVLSINYTSGTTGRPKGVMVTHRGAYLNALGEIIEARLVPESAY LWTLPMFHCNGWYFPYAVTGIGATHVVLPKVDPSRIFQLIEQEGVTHFCGAPTVLIMLLQGRPSPDYRFPRPLTVLTAAA PPAPATIAAMEAMGARIVHVYGLTETYGPHTVCEWHEEWDALPLEERARLKARQGVGYIHAPELRVVDEAMRDVPADGET LGEVVMRGNNVMKGYYRDEEATARAFAGGWFHSGDLAVVHPDGYIELRDRKKDIIISGGENISTIEVERALYQHPAVLEC AVIGIPDEKWGEVPKAFVVLKPGMHATPEELIAFCRDRLAHYKCPKQVELVESLPKTSTGKIQKFVLREREWAGYDKRIH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01500.1 | AMP-binding protein domain | Not tested | PAGI-1 | Protein | 2e-106 | 51 |
