|
Name : mutS (trd_A0449) Accession : YP_002523731.1 Strain : Genome accession: NC_011961 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 435188 - 437833 bp Length : 2646 bp Strand : - Note : identified by match to protein family HMM PF00488; match to protein family HMM PF01624; match to protein family HMM PF05188; match to protein family HMM PF05190; match to protein family HMM PF05192; match to protein family HMM TIGR01070 DNA sequence : ATGGGATCGACGCGACGAGCCATCCAGCACCGGTTGCCGGCGACCAAGGAGTCATCGTCCGACGATTTGGTCCCCTCGCG TCGTCAGTACCTGCGCCTCAAGGCACACTATCCCCATGCCATCTTGCTCTATCGGCTCGGCGACTTCTACGAAGCGTTCG ACGAGGATGCCCGCATCGTCGCCCGCGACGCCCGCATCACCCTCACCTCACGCTCGTTCGGCCGTAACGGTCGGGTGCCG ATGGCCGGCATCCCACACCACGCGTTGAACCACTATCTGGCACGCCTCTTGGCCGCGGGACATACCATTGCTATCGCCGA GCAGGTCAGCGAGCCAGGCAAGGGGCTGGTCGAGCGCGCAGTCACGCGGGTCCTCACGCCGGGAACGGTAGCTGAGGCCG CGTTGCTCCCCACAACCGAGAATCGCTACCTCGCAGCGGTCGCCAGACTTCCCGAGCGAACCGGGCTCGCCTGGGTCGAT GTGAGTACCGGCGAGTTCGCGGTTCTCGAACTCAGCGGAGCGGAGCGCGACCTGCTCCTGGCCGAGGAGTACGCGCGACT CGCTCCCGCCGAAACGCTCGTCCCCGACACAGATGAAATTCCTCTACCGCCCGGCGGGTGCTTGACCCGGCTCGAGCACT GGCATTTCGAGCCGGAACGAGCTGCTCAACGCCTGCGTGCCCTCTTCGCGACGCGCTCGCTCGCCCCCTTCGGCTGCCAA CATCTTCCCGCTGCACTCGCCGCCGCGGGCGCCATCGTGGTCTACCTGGAGCGCACCAATCCGGCGTTGCTCTCTCTCCT GACCAGTCTCCGGACCGAAGTGCCAGCGCGTCGTGTCGGGCTGGATGCTGCCACGCGGCGCAATCTGGAACTCACGCGCA GCCTGGGTACCGGTGGAACGCGCGGCAGCCTGCTCGGCGTGCTCGACCGCACGGTGACGCCGATGGGTGCCCGCACCCTT CGCCGCCTGGTCAGCGAGCCCCTGCGGGACCTGGACGAGCTCCGCCGTCGCCAGCACATCGTCGGCGCGCTCCGAGCAAC CCCCGAACTCCGCTCCCGCTTGGGGTCGATCCTCCTGGCCGCTGGTGATCTCGAGCGCTTGACCAGCAAGATCGTCCAGG GCTCAGCGACCATCCGCGATTTCGCGACACTTCGCCAAGCGCTGGCGACTGCCGAGGCCCTCCGCGGTGCCCTCCAGGCG AGCGGCGAGCCAGCTCTGCAGCGCTTCGCCGACGACTTCATCTCCTGCCCGGAACTCGCCGCGCTCCTGGAACGAGCGCT GATCGAAGACAGCGATGGCCCACGCCTCCGACCAGGCTTTTGTCCGGAACTCGATGCCGTGCTCGCGGCGGTCGAGGAAA CGCGCCGCTTCTTGGCCACGCTCGAACAGCGGGAGCGCGAGCGGACCGGAATCCGCTCCCTCAAAGTCGGTTACAACAAA GTTTTCGGCTACTACATCGAGGTAACTCGGCCCCATCTCAGCCGAGTGCCTCCGGACTACGTCCGCAAGCAGACTGTCGC CACCGGTGAGCGCTTCATCACCCCCGAACTCAAAGACGCTGAGGCACGTCTGCTCGCAGCCGAGGCCGAAATCGCCGAAC TCGAGCGCGCTGCACTGGCACGCTTGACCCGCGAGGTCACCACGCGGACCAACGAACTCTTGCGCCTTGCTGGCTGGATC GCCTGGCTCGATGCCTTCCGCTCCCTGGCCGAAGTCGCGGCGCAGTACGACTGGAGCTGCCCGGAACTGGACGAGTCGGA CACGATCCTGATCGAGGGTGGGCGTCATCCCGTCGTCGAAGTGCTGCTCGATGGACAGCCGTTCGTCCCCAACGATTGCC AGCTGGGCGGCGATGGACCACGCCTCCTCCTGGTCACCGGACCGAACATGGGCGGCAAGAGCACCTATCTTCGGCAAGTC GCCTTGATCGTGCTCTTGGCGCAGATCGGTTCCTTCGTCCCCGCGGCACGCGCCCGCATCGGACTCGTCGATCGCATCTT CTGTCGTGTCGGTGCACACGACGATCTGCCTGGTGGGCAGAGCACCTTCATGGTCGAGATGGTGGAAACGGCCACCATTC TCCGCCAGGCCACCCAGCGCAGCCTCGTGATCCTCGACGAAGTCGGACGGGGCACCGCCACACAGGACGGGCTCGCCATC GCCTGGGCTGTACTGGAAGACCTGCACGATCGGGTCGGAGCTCGCACGCTTTTTGCGACCCACTTCCTCGAGCTGACAGC ATTGGAGGCCGAATTGCCAGGCGTCGCCAACGTCCATGTCGCGGCGATGGAGCAAGACGGGCGAGTGGTCTTCTTGTATC GCGTTCGACCTGGCGCGGCCGACCGGGCCTACGGCATCCATGTGGCCCGGCTGGCCGGCCTCCCTCCTTGGGTAGCTGAT CGAGCCGAGCGATTGCTGATCGGCCGGCCCGCTCCCACGCCGGCCGCGCCGCACTCCGAAACAGCCGAGCACCCGCACGG GCTGACCGCAAGCCCGCACCAGCTCGCGCTTCCCGGCTTCCCCACTCGTCGCCATGCCGCTGAGGAACTGGCTCGCGCGC TGCTCGAGCTCGATCTCGCCAATCTCACGCCGCGCCAAGCGCTGGACTGGCTCTTCGAGCAGCGCGCCAAGCTGGGCAGA GCGTAG Protein sequence : MGSTRRAIQHRLPATKESSSDDLVPSRRQYLRLKAHYPHAILLYRLGDFYEAFDEDARIVARDARITLTSRSFGRNGRVP MAGIPHHALNHYLARLLAAGHTIAIAEQVSEPGKGLVERAVTRVLTPGTVAEAALLPTTENRYLAAVARLPERTGLAWVD VSTGEFAVLELSGAERDLLLAEEYARLAPAETLVPDTDEIPLPPGGCLTRLEHWHFEPERAAQRLRALFATRSLAPFGCQ HLPAALAAAGAIVVYLERTNPALLSLLTSLRTEVPARRVGLDAATRRNLELTRSLGTGGTRGSLLGVLDRTVTPMGARTL RRLVSEPLRDLDELRRRQHIVGALRATPELRSRLGSILLAAGDLERLTSKIVQGSATIRDFATLRQALATAEALRGALQA SGEPALQRFADDFISCPELAALLERALIEDSDGPRLRPGFCPELDAVLAAVEETRRFLATLEQRERERTGIRSLKVGYNK VFGYYIEVTRPHLSRVPPDYVRKQTVATGERFITPELKDAEARLLAAEAEIAELERAALARLTREVTTRTNELLRLAGWI AWLDAFRSLAEVAAQYDWSCPELDESDTILIEGGRHPVVEVLLDGQPFVPNDCQLGGDGPRLLLVTGPNMGGKSTYLRQV ALIVLLAQIGSFVPAARARIGLVDRIFCRVGAHDDLPGGQSTFMVEMVETATILRQATQRSLVILDEVGRGTATQDGLAI AWAVLEDLHDRVGARTLFATHFLELTALEAELPGVANVHVAAMEQDGRVVFLYRVRPGAADRAYGIHVARLAGLPPWVAD RAERLLIGRPAPTPAAPHSETAEHPHGLTASPHQLALPGFPTRRHAAEELARALLELDLANLTPRQALDWLFEQRAKLGR A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 3e-117 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | YP_002523731.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 1e-119 | 42 |
