Gene Information

Name : trd_A0184 (trd_A0184)
Accession : YP_002523466.1
Strain :
Genome accession: NC_011961
Putative virulence/resistance : Virulence
Product : manganese transport system ATP-binding protein MntA
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 167683 - 168507 bp
Length : 825 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGCAGCGAGGAACGGCAGCGCCGGAGCGAGCAGCGCGCGAGGCGACGGCTCTCGCGATCACCGTCGAAGGGCTCACGAC
GGGCTACCGGCGTGGCGAGCCGATCCTGCGCGGGGTGAGTTTCGCGGTCGAGCGCGGCTCGCTGGTCGGCGTGCTGGGGC
CGAACGGGAGCGGGAAGTCGACGCTGTTCCGTGCGTTGCTCGGCCTCTTGCCACCCTGGCAGGGGCGCGTGCTCGTGGAA
GGGAAACCAGCGCGCCCCAATCCGGATATCGCCTACATTCCGCAGCGGGAGACGATCGACTGGGACTTCCCGGTCACTGT
CCTGGACGTGACGCTGATGGGGCGCTACCCGCGGCTGGGGCTGTTCCGTCGCCCCGGAAAGGCTGACCGCGAGCTGGCGC
TGTGGGCGCTCGAGCAGGTGGGGATGCTGGAGTTCCGCGACCGGTTGATCGTCGAGCTTTCCGGTGGGCAACGGCAGCGC
GTCTTCCTCGCGCGGGCACTGGCGCAGGAGCCGGAGATCTTTCTCCTCGACGAGCCAGTGAGCGGTGTCGATGCACCGAC
CCAGCACTTCGTGTTCGAACTCCTGGAGCGGCTCTGTCGGCAGGGAAAGACGGCGCTGGTGGCGACCCACGATCTTTCCT
GCGTGGCGCAACGGTTCGACCGCGTGCTGCTCCTCAACCATGAGGTGATCGCCTATGGGCCACCGCAAGAGGTCTTCACC
GAGACGCTGCTCAACCGCACGTTCCAGTCGCATCTGCTGCTCCTGCGCTACGGTGACCGGGTGATCGTAGTGGAAAGCGA
GGACGGGGATGAGCGGAGTTGTTGA

Protein sequence : 
MQRGTAAPERAAREATALAITVEGLTTGYRRGEPILRGVSFAVERGSLVGVLGPNGSGKSTLFRALLGLLPPWQGRVLVE
GKPARPNPDIAYIPQRETIDWDFPVTVLDVTLMGRYPRLGLFRRPGKADRELALWALEQVGMLEFRDRLIVELSGGQRQR
VFLARALAQEPEIFLLDEPVSGVDAPTQHFVFELLERLCRQGKTALVATHDLSCVAQRFDRVLLLNHEVIAYGPPQEVFT
ETLLNRTFQSHLLLLRYGDRVIVVESEDGDERSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-42 43
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-42 43
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-43 43
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-43 43
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 9e-44 43
adcC YP_006309084.1 ABC transporter, Zn porter Not tested FWisland_5 Protein 1e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
trd_A0184 YP_002523466.1 manganese transport system ATP-binding protein MntA BAC0400 Protein 3e-46 50
trd_A0184 YP_002523466.1 manganese transport system ATP-binding protein MntA BAC0350 Protein 6e-44 43
trd_A0184 YP_002523466.1 manganese transport system ATP-binding protein MntA BAC0440 Protein 2e-46 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
trd_A0184 YP_002523466.1 manganese transport system ATP-binding protein MntA VFG0526 Protein 5e-44 43