Gene Information

Name : trd_0819 (trd_0819)
Accession : YP_002522047.1
Strain : Thermomicrobium roseum DSM 5159
Genome accession: NC_011959
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 797548 - 798240 bp
Length : 693 bp
Strand : -
Note : identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044

DNA sequence :
ATGCAAGAGTACGAGCGACTGCGCGAGCATTTGGCTCGTGTGCGATGCCGTATCGAGCGGGCGGCTGAACGAGCAGGACG
CGATCCACAGAGCGTGCAGATCGTCGCTGTGACGAAAGGGATCGATCGGGAAAAAGTGCAGGCAGCGTACGAACTCGGCC
TACGCCTTTTCGGGGAAAACCGCGTTCAGGAGGCACAGCGAAAGTTCGGTGAAAACCCGCTTCCACCTGATGCGGAGCTT
CATCTCATTGGCTATCTGCAAACCAACAAGGTTCGACATGCCGTCAAGCTCTTCGCTCTGATCCATTCCGTTGACCGTGC
AGCTCTCATCGAGGAACTGCACGAACGAGCTGCGCGCGTTGGCCGCCGCCTTCCTATCTTGATTCAGGTGAATATCGCCG
GCGAGGAACAGAAACACGGTTGTCGACCGGCTGAGGCTGCTGAACTTCTCGCTTTGGGGCTCACGAAACCACATTTGGAC
GTTCGCGGCCTGATGACGATCGCACCGCTCGTAGCAGAAAGCGAACTTGTCCGGCCAGTCTTCCGCGCACTGCGGGAGCT
GCGCGATCAGCTTCAAGAACGTTTCCAACACCCTCTCCCGGAGCTTTCCATGGGCATGTCGAACGATTTCGACATCGCTG
TCGAGGAAGGAGCGACGCTCGTCCGGATCGGTCGCGCGCTGTTCGGAGACTAA

Protein sequence :
MQEYERLREHLARVRCRIERAAERAGRDPQSVQIVAVTKGIDREKVQAAYELGLRLFGENRVQEAQRKFGENPLPPDAEL
HLIGYLQTNKVRHAVKLFALIHSVDRAALIEELHERAARVGRRLPILIQVNIAGEEQKHGCRPAEAAELLALGLTKPHLD
VRGLMTIAPLVAESELVRPVFRALRELRDQLQERFQHPLPELSMGMSNDFDIAVEEGATLVRIGRALFGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-25 44
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-25 44
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-25 44
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 3e-25 44