|
Name : trd_0794 (trd_0794) Accession : YP_002522023.1 Strain : Thermomicrobium roseum DSM 5159 Genome accession: NC_011959 Putative virulence/resistance : Unknown Product : putative ornithine cyclodeaminase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG2423 EC number : - Position : 777431 - 778420 bp Length : 990 bp Strand : - Note : identified by match to protein family HMM PF01488; match to protein family HMM PF02423 DNA sequence : ATGCTGGTCTTGACGCGACGCGACGTGCAAGAACTCGTGCCGATGTCGAGAGCGATAGAACTCGTCAAGCAGGCCTTCCG CGATCTCTCCCTCGGTCGAGCACAGTCACCGCTGCGGACACCGCTCGAGGTTGTGGACCACAACGGTACCGTCCTCTTCA TGCCAGCTTTCGTCCCCTCGACCGGTGGACTCGGCCTGAAGGTCGTCTCGGTGTTTACTGACAACCCGCGCCTGCATAGC AAGCCGACCATTCACGCGGCAGTCCTCACCGTCGACCCGATCACGGGCGAACCGAGCGCGTTGCTCGACGGCACCTATCT CACTGCTCTCCGTACCGGAGCCGCCTCCGGTGCCGCTACCGACCTACTGGCCCGCCACGACGCCGAAACGCTTCTCATCA TCGGCGCCGGAGCACAGGGTCCGACGCAGGCATGGGCGGTCCTGACTGTTCGACCGATTCGAAAAGTCTATGTGTACGAT CGCAACCGTGAAGCCGCCGCAACCTTCGGTGACCGTCTTCGCCAGCTCATGCCTGATTGTTCAGCCGAGGTCATTCCGAT CGAAGATCCGCTCACGGTCTTGCCCCGTGTCGACGTTATCTGTACCGCCACCACAGCTCGAGAACCGCTCTTTCCTGACA AACTCGTACCAGCAGGCGTCCATATCAATGCCATTGGCGCCTTTACTCCCGAGATGCAGGAGATCCCACCGGAAACAGTA GCTCGGGCTTACGTCGTGGTCGACGCGCTGAGCGCAGCGCTCGCCGAGGCAGGTGACCTGATCAAGCCACTTCGCGCTGG TCTCATCGACGAAGAGCATATTCGAACCGAACTCGGTCAGATCGTCGCCGGGGAGAGGCCAGGTCGGACATCGCCCGAGC AAATCACCCTTTTCAAATCAGTGGGTAACGCCGTTCAGGATCTGGCAGTCGCCGCCGAAGCCGTGAGCCAGGCTGTTGCG AGAGGGCGTGGGCTCACGATCTCGTTGTGA Protein sequence : MLVLTRRDVQELVPMSRAIELVKQAFRDLSLGRAQSPLRTPLEVVDHNGTVLFMPAFVPSTGGLGLKVVSVFTDNPRLHS KPTIHAAVLTVDPITGEPSALLDGTYLTALRTGAASGAATDLLARHDAETLLIIGAGAQGPTQAWAVLTVRPIRKVYVYD RNREAAATFGDRLRQLMPDCSAEVIPIEDPLTVLPRVDVICTATTAREPLFPDKLVPAGVHINAIGAFTPEMQEIPPETV ARAYVVVDALSAALAEAGDLIKPLRAGLIDEEHIRTELGQIVAGERPGRTSPEQITLFKSVGNAVQDLAVAAEAVSQAVA RGRGLTISL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0124 | AAM75325.1 | EF0124 | Not tested | Not named | Protein | 2e-47 | 43 |
| EF0616 | NP_814373.1 | ornithine cyclodeaminase | Not tested | Not named | Protein | 3e-47 | 43 |
