Gene Information

Name : rdgB (trd_0741)
Accession : YP_002521972.1
Strain : Thermomicrobium roseum DSM 5159
Genome accession: NC_011959
Putative virulence/resistance : Unknown
Product : non-canonical purine NTP pyrophosphatase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : -
Position : 730613 - 731245 bp
Length : 633 bp
Strand : -
Note : identified by match to protein family HMM PF01725; match to protein family HMM TIGR00042

DNA sequence :
ATGCCGACACATCGGATCGTTCTCGCAACGGCCAACCCAGGAAAGATCCGCGAACTCCGCTCCCTGCTCCCGCCGAACGT
CGAAGTCGTGAGCGCGCCCGCACTCGGCATCCGACTTCCGCCCGAAACCGGCGAAACCTTCGTCGAGAACGCACTGCTCA
AAGCCAGGGTCGCTGCCCAGGAAAGCGGCCTTATCGCGCTCGCCGATGATTCCGGACTCGAAGTCGACGCGCTGGGGGGA
CGACCCGGCGTCCACTCTGCCCGATACGCTGGTGAGCACGCGGACGATGCTCAAAATATCGCCCGGTTACTGCGTGAGCT
GCGTGATGTCCCCCTTTCCCAACGTACCGCGCGTTTCCGTGCGGTCGTCGCGATCGTCGCACCGGATGGTCGGGAAGCCG
TCGTCGAAGGCACGGTCGAAGGGTGTATTGCCGAAAAGCCACGCGGTCGCGGCGGTTTCGGATACGATCCCGTCTTCATT
CCCTGCGGGTATGACCGGACATTCGCAGAGATGACGCTGGAAGAGAAGAATCGCTTGAGCCACCGTGCTCAGGCTCTCCA
GCGCGCCGTACCGATCTTGCTCGACTGGCTCGGCTGTACCGGCCAGGCTGCCGATAATGATGACAGCAGCTGA

Protein sequence :
MPTHRIVLATANPGKIRELRSLLPPNVEVVSAPALGIRLPPETGETFVENALLKARVAAQESGLIALADDSGLEVDALGG
RPGVHSARYAGEHADDAQNIARLLRELRDVPLSQRTARFRAVVAIVAPDGREAVVEGTVEGCIAEKPRGRGGFGYDPVFI
PCGYDRTFAEMTLEEKNRLSHRAQALQRAVPILLDWLGCTGQAADNDDSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 1e-20 43