Gene Information

Name : trd_0599 (trd_0599)
Accession : YP_002521841.1
Strain : Thermomicrobium roseum DSM 5159
Genome accession: NC_011959
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 592212 - 593018 bp
Length : 807 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
GTGGTGAGCCGCGTCGATACCGACTGGCGCCTGGAACTTCGCGGTGTCACCAAGGTCTTCCAGCGTGACCAGCTGCAGGT
TCATGCTCTCGGCCCGCTCGACCTGCGCGTCGCCGACGGTGAGTTCGTCAGCATCATCGGGCCGTCCGGATGCGGGAAGA
GCACGCTTCTCGACATGATCGCCGGTCTCGAGCAGCCGACGAGCGGAGAGATCTGGCTCGATGGAGCTCCCGCCCCGTAC
CGACTCGGTAAGGTCGCCTACATGCACCAACGTGACCTCCTTCTCCCCTGGCGGACAGTGCTCGAGAACGCGATCCTTCC
CCTGGAGGTAAAACGCATTCCTCGTCGCCAGGCCATCGAGCGAGCGATGCCGTGGCTCCGCCGTTTTGGCTTGGCCGAGT
TCGCTTCTAGTTATCCAGCACAACTCTCGGGCGGCATGCGCCAGCGCGCGGCGTTTTTGCGCACGCTGCTCACCCAATGC
CCGCTCATGCTCCTGGACGAGCCGTTCGGTGCACTCGATGCCTTGACGCGCTCGAGCATGCAGGAGTGGTTACTCATGCT
GTGGGAGGAGCTCGACCGCACTGTCATCCTCGTCACGCATGACGTCGAGGAGGCAGTCTTGCTCAGCGATCGCGTCGTTG
TCCTCAGCCAGCGTCCCGGCACGATCGTGGCCGACATTCCCGTCGATTTGCCCCGCACCCGGACATACGCGATCGTGACC
GACCAGGCATTCGTCTCCCTCAAAGCGCGCTTGCTCGCCACGCTCCGTCGCCAGCCAACCCTGGGAGTTGTGACCGATGA
TGCGTGA

Protein sequence :
MVSRVDTDWRLELRGVTKVFQRDQLQVHALGPLDLRVADGEFVSIIGPSGCGKSTLLDMIAGLEQPTSGEIWLDGAPAPY
RLGKVAYMHQRDLLLPWRTVLENAILPLEVKRIPRRQAIERAMPWLRRFGLAEFASSYPAQLSGGMRQRAAFLRTLLTQC
PLMLLDEPFGALDALTRSSMQEWLLMLWEELDRTVILVTHDVEEAVLLSDRVVVLSQRPGTIVADIPVDLPRTRTYAIVT
DQAFVSLKARLLATLRRQPTLGVVTDDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-34 42