|
Name : nadC (trd_0595) Accession : YP_002521837.1 Strain : Thermomicrobium roseum DSM 5159 Genome accession: NC_011959 Putative virulence/resistance : Unknown Product : nicotinate-nucleotide pyrophosphorylase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0157 EC number : 2.4.2.19 Position : 588180 - 589196 bp Length : 1017 bp Strand : + Note : identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078 DNA sequence : GTGGTGCTGGCTCCAAGAAAGGCACGCCTGCTACGCCTGGTGTTCGGGATATCGAGGAGCGAGTTGGCCAGGGCCAGGGG CGCTCGACTATCCTGGGAAGCGAGAAAGCGTGGGCTGCGAACGGTGGTGACTGTGCTGAGGAGCGGTACCTTGGTTGCGC CCGACTGGGACATTCCGCTTCTGGTCCTCCGCGAATCGGTCTGCGCGTGGTTGCGCGAGGATTTGGGCTATGGGGATCGC ACCACACTTGCGGTCGTGTCTCCGGGTGCGACCGGCACTGCGGCGATCGTGATGCGGCAACCCGGTGTCCTCTGTGGAAT GCCCGTGATCGAAGCAGTCTTTGCCGAGCTCGACACACGCCTCCGGGTCACGACGATGTGTCGGGAGGGGGAATTGGTTC CGGAGGGCACCGTTGTCGGCCAAGTTGTGGGACCGCTCCGCGGCATCCTTGCTGGTGAGCGACTGGCACTCAATCTCCTG CAGCGCCTTTCCGGTATCGCGACACTGACTCGCCGCTTCGTCGATGCGGTGGCTGGGACGGGCGTGATGATCCTGGATAC TCGCAAAACGACACCGGGGCTTCGTTTGCTCGAGAAGTACGCGGTACGCGTCGGGGGTGGGCGGAACCACCGCTTCGGTC TGTTCGATGGGGTTCTCATCAAGGACAACCACGTCCGAGTGGCGGGAAGTGTGCGCGAAGCTGTGCAGCGGGTACGCAAC GTGATTCCACACACGATGCTGGTCGAAGTCGAGGTGACGACGCTCGAGGAATTGGACGAAGCACTGGCCGCTGGTGCGGA CTGGATTCTGCTCGATAACATGGATGTCGAGACGATGCGTGAGGCCGTCCGTCGCGTGGCTGGGCGTGCCAAGCTCGAGG CATCCGGTGGTGTAACGCTCGAGCGCGTGCGCGCGATCGCCGAGACAGGAGTGGATGCGATTTCGGTCGGCGCGCTGACG CACTCAGCGTCTGCACTCGACATCTCCCTGGAGGTCGTGGCTGTCGACGGACGCTGA Protein sequence : MVLAPRKARLLRLVFGISRSELARARGARLSWEARKRGLRTVVTVLRSGTLVAPDWDIPLLVLRESVCAWLREDLGYGDR TTLAVVSPGATGTAAIVMRQPGVLCGMPVIEAVFAELDTRLRVTTMCREGELVPEGTVVGQVVGPLRGILAGERLALNLL QRLSGIATLTRRFVDAVAGTGVMILDTRKTTPGLRLLEKYAVRVGGGRNHRFGLFDGVLIKDNHVRVAGSVREAVQRVRN VIPHTMLVEVEVTTLEELDEALAAGADWILLDNMDVETMREAVRRVAGRAKLEASGGVTLERVRAIAETGVDAISVGALT HSASALDISLEVVAVDGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nadC | YP_281534.1 | nicotinate-nucleotide pyrophosphorylase | Not tested | Not named | Protein | 2e-40 | 41 |
