Gene Information

Name : trd_0572 (trd_0572)
Accession : YP_002521818.1
Strain : Thermomicrobium roseum DSM 5159
Genome accession: NC_011959
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 570358 - 571818 bp
Length : 1461 bp
Strand : -
Note : identified by match to protein family HMM PF06545

DNA sequence :
ATGGACGGAATGCACGAGAAAGTGCAAAAGCTTCTCGAGACCACACCCGCAGTCATCAACGTCGGGCTCGACCTCTTCGC
CCGATCGGTGCAGGATCAGGGCGGAGCAGTCTATCCAGTCGAATGGAAGCCACCGATGGTCGAGCCGCGCCGACTCGCGC
TGCCGCTTTTCAACGACCCAACGATCGATGCGGCGAATCGCGAAGCGGTGACACGCATGATGCGCGCTCAACCGGTCGTC
GTTGGCGTAGCGCGCGCCCGTGACGTGATACCCGGCATGACCGACCGGACGTTCCTCCACGCCGGCCCTCCCATCGACTG
GGCTCACGCGTCCGGTCCGCTCCGCGGAGCCCTGATCGGTGCCATGCTCTTCGAGGGATTCGCGGCGACACCAGAGGAAG
CGATCCGGAAGCTGGAATCCGGCTACGTCGAACTTTCCCCAAATCACGAGCATAGCGCGGTCGGGCCGATGGCCGGTGTC
ATTTCCCCTTCTATGCCCGTCTATATCGCGATCAATGCTGCCGGCGAGAATCGCGCCTACACCAACTTCAACGAAGGCAT
CGGCAAAGTGATGCGGATGGGTGCCTATGCCCCGGAGGTGATCGATCGACTGCGTTGGATCAGCACCGTCCTCGCGCCAC
TCGTTGGGCAAGCTCTGGCCAGGAGCGGTGGCATCGATCTCCGCAATATCATCGCTCAGGCCTTACAAATGGGTGACGAA
TGCCACAATCGCAACAAGGCCGCAACCTCCCTGTTCTATCGTGAAATCGCGCCCTACCTCGTCGAGTGCGATGCGCCCTT
GAGCGATATCGCTGCCGTCCTCCGGTTCATCAATGCCAATGACCACTTTTTCGTGAATCTCGCGATGGTGGCAGCCAAGG
TGATGGCGGATGCCGCACACGGCATTCCGGGAAGCTCGCTCGTCACCACTCTCTCGCGGAACGGTACGGAGTTCGGCATC
CGCGTTTCCGGGCTGGGCGACCGCTGGTTCACCGGTCCAGCCAACGTACCGCGCGGCTTGTACTTTCCTGGGTTCGGGCC
TGACGACGCGAATCCCGATATCGGTGACAGCGCGATCACCGAAACCGCCGGTTTCGGCGGTTTCGCACTCGCTGGCGCTC
CGGCGATCGTGCAGTTCATCGGCGGCACGCCGGCCGACGCAGTCCAGGCCACGCTCGAAATGTACGAGATCACCGTTGCT
GAGCACGAGGTGTTCCGCATCCCCGCGCTCGACTTCCGCGGTACTCCCGTCGGTATCGATCTGCGTTCGGTCGTGCGGAG
CGGTATCTTGCCGGTCATCGATACGGGTATCGCCCACCGCGAGCCTGGCATCGGGCAGGTGGGAGCCGGTATCGTCCGAC
CACCCGCGCGATGCTTCACCGAAGCCTACCGGGCCTTCGAGGATGCGTATCTCGCAGGACACAGTCGAACCACTACCTTG
GAGTCGAGGGGGATGGCATGA

Protein sequence :
MDGMHEKVQKLLETTPAVINVGLDLFARSVQDQGGAVYPVEWKPPMVEPRRLALPLFNDPTIDAANREAVTRMMRAQPVV
VGVARARDVIPGMTDRTFLHAGPPIDWAHASGPLRGALIGAMLFEGFAATPEEAIRKLESGYVELSPNHEHSAVGPMAGV
ISPSMPVYIAINAAGENRAYTNFNEGIGKVMRMGAYAPEVIDRLRWISTVLAPLVGQALARSGGIDLRNIIAQALQMGDE
CHNRNKAATSLFYREIAPYLVECDAPLSDIAAVLRFINANDHFFVNLAMVAAKVMADAAHGIPGSSLVTTLSRNGTEFGI
RVSGLGDRWFTGPANVPRGLYFPGFGPDDANPDIGDSAITETAGFGGFALAGAPAIVQFIGGTPADAVQATLEMYEITVA
EHEVFRIPALDFRGTPVGIDLRSVVRSGILPVIDTGIAHREPGIGQVGAGIVRPPARCFTEAYRAFEDAYLAGHSRTTTL
ESRGMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yahG YP_859423.1 hypothetical protein Not tested Not named Protein 4e-103 49